CN182064

Overview
NameCN182064
Unique NameCN182064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1518 contig Csv1_Contig1518:30..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.347e-50
Identity = 107/207 (51.69%), Postives = 145/207 (70.05%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            EEE   F  AM LASA VLP V+++ +ELD+ E+I+KAGPGA +S +E+ AQ+P   +NPEA    LDR+LRLL +Y+ L C   +  DG  +RLY LAPV K F+  N DGVS+ P + +  DK+ ++ W+ LK  +L+GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE Y+GFE +K +VDVGGG   TLN
Sbjct:    3 EEEACLF--AMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPT--HNPEAPIM-LDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCK-FLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLN 203          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.652e-49
Identity = 107/207 (51.69%), Postives = 140/207 (67.63%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+A    LDR+LRLL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  ILEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDVGGG    +N
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPDAPVM-LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVN 216          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.158e-49
Identity = 103/207 (49.76%), Postives = 144/207 (69.57%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVDG-----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +EE      AM LASA VLP V+++ +ELD+ E+I K+GPGA +S +E+ AQ+P +  NP+A    LDR+LRLL SY+ L+C+  D      +RLYSLAPV K F+  N DGVS+   + +  DK+ ++ W+ LK  +LEGGI FNKA+GM  ++Y G D RFN VFN GM +H++I+M+K+LE Y+GF+ +K +VDVGGG   TLN
Sbjct:   14 KEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQ--NPDAPVM-LDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCK-FLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLN 216          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.680e-49
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+A    LDR+LRLL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  IL+GGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDVGGG    +N
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPDAPVM-LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVN 216          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 8.199e-49
Identity = 102/207 (49.28%), Postives = 142/207 (68.60%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            + E   F  AM LASA VLP V+++ +ELD+ EI++KAGPGA +S +E+ AQ+P K  NPEA    LDR+LRLL +Y+ L+C+     DG  +RLYSLAPV K  +  N DGVS+ P + +  DK+ ++ W+ L   +L+GG+ FNKA+GM  ++Y G D RFN VFN GM  H+++ M+K+LE YKGFE +  +VDVGGG   T+N
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTK--NPEAPVM-LDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-LLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVN 212          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.827e-48
Identity = 107/207 (51.69%), Postives = 141/207 (68.12%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPGA LS  E+ AQ+P +  NPEA    LDR+ RLL SY+ L C+     DG  +RLY LAPV K  V+N  DGVS+     +  DKI ++ W+ LK  +LEGGI FNKA+GM  ++Y G D RFN +FN GM  H++I M+K+LE+YKGFE ++ +VDVGGG    L+
Sbjct:   17 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQ--NPEAPVM-LDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNE-DGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLS 217          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.827e-48
Identity = 103/207 (49.76%), Postives = 141/207 (68.12%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            + E   F  AM LASA VLP V++A VELD+ EI++K+GPGA +S +E+ AQ+P K  NPEA    LDR+ RLL +Y+ L+C+     DG  +RLYSLAPV K F+  N DGVS+ P + +  DK+ ++ W+ L   +L+GG+ FNKA+GM  ++Y G D RFN VFN GM  HT++ M+K+LE Y GFE +  +VDVGGG   T+N
Sbjct:   10 QTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTK--NPEAPVM-LDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-FLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVN 212          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.116e-48
Identity = 106/206 (51.46%), Postives = 138/206 (66.99%), Query Frame = 1
Query:   22 EETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +E  NF  AM LASA VLP V+++ +ELD+ E+I KAG GA +S AE+ AQ  L   N EA    LDR+LRLL SY  L C   +  DG  QRLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK  +L+GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE+Y GF+ +K +VDVGGG   TLN
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQ--LLTTNAEAHVM-LDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCK-FLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLN 214          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.069e-48
Identity = 107/207 (51.69%), Postives = 139/207 (67.15%), Query Frame = 1
Query:   19 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPG  LS  +I +Q+P K  NP+A    LDR+LRLL SY+ L  S     DG  +RLY L PV K F+  N +GVS+ P   +  DK+ L+ W+ LK  +LEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDVGGG    LN
Sbjct:   16 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTK--NPDAPVM-LDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCK-FLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLN 216          
BLAST of CN182064 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.019e-47
Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = 1
Query:   46 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLRLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLRTTLN 624
            AM LA+A VLPAV+ A +ELD+ EI+++AGPGA L+  E+ +Q+P +  NP+A    LDR+ RLL SY+ L C+  D      +RLY LAP+ K  V+N  DGVSL P   +  D++ L+ W+ +K  ILEGGI F+KAHGM  +DY G D RFN +FN  M  H++I+M+K+LE+Y GFE +K +VDVGGG    LN
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQ--NPDAPVM-LDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNE-DGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILN 198          
The following BLAST results are available for this feature:
BLAST of CN182064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_COFCA4.347e-5051.69Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_POPKI1.652e-4951.69Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CATRO2.158e-4949.76Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPTM3.680e-4951.21Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CAPAN8.199e-4949.28Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_EUCGU1.827e-4851.69Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CAPCH1.827e-4849.76Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT2_OCIBA3.116e-4851.46Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_PRUDU4.069e-4851.69Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_EUCGL2.019e-4750.00Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182064 ID=CN182064; Name=CN182064; organism=Citrus sinensis; type=EST; length=626bp
GAGGCTATAGCTGATCAGGAAGAAGAGACAAATAATTTCTCACATGCAAT
GGGACTTGCAAGTGCAATAGTGCTACCTGCAGTTATGCAAGCAGTGGTAG
AGCTTGATGTGTTTGAGATCATAAGCAAAGCCGGTCCTGGTGCTAAGCTT
TCGGTTGCGGAGATTGTGGCTCAAATTCCCTTAAAAGATAATAATCCTGA
AGCTGCAGCCACGACGTTGGATCGGGTGCTGAGGCTGCTTGTCAGCTACA
ACGCTCTTCATTGCTCTTTTGTCGATGGACAAAGGCTCTACTCTCTTGCT
CCTGTTTCTAAACACTTTGTTCGCAACAATCGAGACGGCGTGTCGTTGCG
TCCCTACATGGCCTTGTGTCTCGACAAGATCTGCTTGGATGGCTGGTTTG
GATTGAAAAAGCAGATTCTTGAAGGAGGAATTGCGTTTAATAAAGCGCAC
GGAATGCAAATCTATGATTACCTAGGCGTCGACTCAAGGTTCAATGATGT
TTTCAATAATGGAATGTTAAGCCACACTTCTATTGTCATGGAGAAGGTCC
TAGAATCATACAAAGGCTTTGAGCATGTTAAGAAGCTTGTTGATGTTGGC
GGCGGCTTAAGAACTACCCTGAACAT
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