CN182063

Overview
NameCN182063
Unique NameCN182063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1518 contig Csv1_Contig1518:814..1254. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.533e-15
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LK LKNC +ALPD GK++     +   P +  A++ +  +D I+L   P G+ER  +E+ +LA  AGF+G    C   N Y+MEFLK
Sbjct:  271 WSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.642e-14
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LK LKNC  ALPD GK++     +   P +  A++ +  +D I+L   P G+ER  QE+  LA  AGF+G +  C   N YV+EFLK
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.800e-14
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LK LKNC  ALP+ GK++     +   P    A++ +  +D I+L   P G+ER  +E+  LAI AGFKG    C   N YVMEFLK
Sbjct:  276 WSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.657e-14
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LK LKNC  ALPD GK++     +   P    A++ +  +D ++L   P G+ER  QE+  LA  +GF+G+   C   N YV+EFLK
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LKLLKNC  ALP+ GK++     + EVP +  A++ +  +D I +   P G+ER  +E+  LA  AGF+G    C   N Y++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LKLLKNC  ALP+ GK++     + EVP +  A++ +  +D I +   P G+ER  +E+  LA  AGF+G    C   N Y++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  L+LLKNC  ALP+ GK++ +   +   P    A++ +  +D I+L   P G+ER ++E+  LA  AGFKG    C   N +V+EF K
Sbjct:  270 WSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.537e-12
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  LKLLKNC  ALPD GK++     +   P    A++ +   D ++L   P G+ER  +E+  LA+ +GF+G        N YVMEFLK
Sbjct:  274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.007e-12
Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + DE  L  LKNC  ALP+ GK++ +   +   P    A++ +  +D I+L   P G+ER ++E+  LA  AGFKG    C   N +V+EF K
Sbjct:  270 WSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CN182063 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.007e-12
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = -3
Query:  162 FDDEQTLKLLKNCTKALPDGGKLLNINSTISEVPQNRAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 440
            + D   L++LKNC K+LP+ GK++     + E P    A++ +  +D I+L   P G+ER  +E+  LA  AGFKG +      N +VMEF K
Sbjct:  262 WSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
The following BLAST results are available for this feature:
BLAST of CN182063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
COMT1_MEDSA2.533e-1540.86Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU1.642e-1441.94Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CLABR2.800e-1443.01Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ROSCH3.657e-1439.78Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT2_CHRAE8.148e-1439.78Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE8.148e-1439.78Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT3_POPKI5.281e-1338.71Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
IEMT_CLABR1.537e-1239.78(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT2_POPTM2.007e-1237.63Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ZINEL2.007e-1237.63Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182063 ID=CN182063; Name=CN182063; organism=Citrus sinensis; type=EST; length=442bp
GGGAATCATCTCCCTATAAGAGATTTATTATTGATAAAACGAAAGAGATT
ACATAAGAGAAGCCCTCAATCCAAAGGAAAGAGATAACAAGACAAACCGG
AAATTGAAAACAACCCAAGAAAGCTAAGGAGATCTTTCCGAATAGAGAAA
AAAGCAATCTATTTCAAGAACTCCATAACATATAAATTACATACACCACA
TTCGTAGCTGACACCTTTAAATCCAGCTTTAATTGCCAATTCATTGTATT
CTTGGTTGGGGCGCTCTCTTCCATGAGGAATTTGGATCAACAAAATTGTA
TCCAAAATAGAGATTTCCCTTGAAGCCGCCCTATTTTGAGGCACTTCTGA
AATTGTTGAATTAATATTGAGCAGCTTCCCACCATCTGGAAGAGCTTTGG
TACAATTCTTCAACAATTTCAAAGTTTGCTCATCATCAAAAT
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