CN182009 | Citrus Genome Database

Overview


Name	CN182009
Unique Name	CN182009
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	705

Libraries


Library Name	Type
Ruby Orange Developing Flower cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:68..773.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.204e-81
Identity = 149/159 (93.71%), Postives = 156/159 (98.11%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF S+YPIVS++DPFDQDDWEHY+KLTSE+GEKVQIVGDDLLVTNPKRVEKAI+EK CNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  287 LYKSFASEYPIVSIEDPFDQDDWEHYSKLTSEIGEKVQIVGDDLLVTNPKRVEKAIQEKACNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.807e-81
Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+++YPIVS++DPFDQDDWEHYAKLTSE+G KVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  287 LYKSFVTEYPIVSIEDPFDQDDWEHYAKLTSEIGVKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.739e-80
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+++YPIVS++DPFDQDDW HYAKLTSE+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  287 LYKSFVAEYPIVSIEDPFDQDDWAHYAKLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.246e-78
Identity = 144/159 (90.57%), Postives = 154/159 (96.86%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+ +YPIVS++DPFDQDDWEHY+KLT+E+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMA HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  283 LYKSFVDEYPIVSIEDPFDQDDWEHYSKLTAEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMA-HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.126e-78
Identity = 141/159 (88.68%), Postives = 155/159 (97.48%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            +YKSF+S+YPIVS++DPFDQDDWEHYAK+T+E+GE+VQIVGDDLLVTNP RV KAI+EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  288 VYKSFVSEYPIVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.378e-77
Identity = 141/159 (88.68%), Postives = 153/159 (96.23%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+S+YPIVS++DPFDQDDWE YAKLT+E+GE+VQIVGDDLLVTNPKRV KAI EKTCNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  286 LYKSFVSEYPIVSIEDPFDQDDWETYAKLTAEIGEQVQIVGDDLLVTNPKRVAKAIAEKTCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.351e-77
Identity = 140/159 (88.05%), Postives = 153/159 (96.23%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            +YKSF+S+YPIVS++DPFDQDDW HYAK+T E+GE+VQIVGDDLLVTNP RV KAIKEK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  288 VYKSFVSEYPIVSIEDPFDQDDWVHYAKMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.009e-77
Identity = 140/159 (88.05%), Postives = 152/159 (95.60%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+++YPIVS++DPFDQDDWEHYAK+T+E GEKVQIVGDDLLVTNPKRV+KAI E  CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  286 LYKSFVAEYPIVSIEDPFDQDDWEHYAKMTAECGEKVQIVGDDLLVTNPKRVKKAIDENPCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.237e-77
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+S+YPI S++DPFDQDDW  YAKLT E+G+KVQIVGDDLLVTNP RV KAI EKTCNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  288 LYKSFVSEYPIESIEDPFDQDDWSTYAKLTDEIGQKVQIVGDDLLVTNPTRVAKAINEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN182009 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.790e-76
Identity = 136/159 (85.53%), Postives = 151/159 (94.97%), Query Frame = -3

Query:  227 LYKSFISDYPIVSMKDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 703
            LYKSF+++YPIVS++DPFDQDDWEHYAK+T+E G +VQIVGDDLLVTNPKRV KAI EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  286 LYKSFVAEYPIVSIEDPFDQDDWEHYAKMTTECGTEVQIVGDDLLVTNPKRVAKAIAEKSCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

The following BLAST results are available for this feature:

BLAST of CN182009 vs. ExPASy Swiss-Prot

BLAST of CN182009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	1.204e-81	93.71	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO2_HEVBR	7.807e-81	92.45	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO1_HEVBR	1.739e-80	91.82	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO_ALNGL	1.246e-78	90.57	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO_ORYSJ	2.126e-78	88.68	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO_SOLLC	1.378e-77	88.68	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO2_MAIZE	2.351e-77	88.05	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_MESCR	4.009e-77	88.05	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO1_MAIZE	5.237e-77	89.31	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_ARATH	5.790e-76	85.53	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS04_0001N01_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001N01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN182009 ID=CN182009; Name=CN182009; organism=Citrus sinensis; type=EST; length=705bp
GCCTTAGCACGCAACTAGATACTCATTTTAAAAAACATGCTCTAGGAAAT
GGTTCCTCATACAGCAAGGTTCAAGCTCTCAGACAAAAACTGTGTCAAAA
TTATTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATC
CATTTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACC
ACACCAGATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAA
CTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCA
GAAGCTGATTATACTTTGCAAGACGCTCTGACCTGCATGGTGCTCCTGTC
TTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCGGCAATGAAAGTATC
TTCAGTCTCACCACTGCGGTGGCTGGCCATCACACCCCACCCAGCTTGCT
TGGACATTCTGACGGCTTCAATGCTCTCAGTTACAGATCCAATTTGATTA
ACCTTGAGAAGGAGGGCGTTGCAGGTCTTCTCTTTGATAGCCTTCTCAAC
CCTCTTAGGATTGGTGACCAAAAGATCATCTCCAACAATTTGTACTTTTT
CTCCAACCTCACTGGTTAGCTTGGCATAGTGCTCCCAGTCGTCTTGGTCA
AATGGATCCTTCATTGATACAATAGGATAATCAGAGATGAATGACTTATA
GAGAT