CN182008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_ACICJ (Elongation factor Ts OS=Acidiphilium cryptum (strain JF-5) GN=tsf PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 ++K LRE+T A M D K ALV+ D D+EAA+ LRK+G A+KKS RTA EGL+ +A ++A+++E+N ETDFV+RNE FQ Sbjct: 8 MVKDLREKTGAGMMDCKKALVETDGDMEAAVDWLRKKGLAAAAKKSGRTAAEGLVGVAHEGNRASMVEVNAETDFVARNEAFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_THET8 (Elongation factor Ts OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tsf PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 316 QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLA--LAQNESKAAVIELNCETDFVSRNEIFQ 573 Q+ LIK+LRE T A M DVK AL D WD E A++ LR+RG + A+KK+ R A EG++ + N+ ++ELNCETDFV+RNE+FQ Sbjct: 3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_THET2 (Elongation factor Ts OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tsf PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 316 QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLA--LAQNESKAAVIELNCETDFVSRNEIFQ 573 Q LIK+LRE T A M DVK AL D WD E A++ LR+RG + A+KK+ R A EG++ + N+ ++ELNCETDFV+RNE+FQ Sbjct: 3 QTELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_RHIME (Elongation factor Ts OS=Rhizobium meliloti GN=tsf PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 ++K+LRE+T A M D K AL + + D+EAA+ LR +G A KKS RTA EGL+ +A + +KA V+E+N ETDFV+RN+ FQ Sbjct: 7 MVKELREKTGAGMMDCKKALAETNGDMEAAIDWLRAKGIAKADKKSGRTAAEGLIGIASSGTKAVVVEINSETDFVARNDAFQ 89
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_AGRRK (Elongation factor Ts OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tsf PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 L+K+LRE++ A M D K AL++ + DIEAA+ LR +G A KKS RTA EGL+A+A KA V+ELN ETDFV+RN+ FQ Sbjct: 8 LVKELREKSGAGMMDCKKALIETNGDIEAAIDWLRAKGISKADKKSGRTAAEGLVAIAGAGHKAVVVELNSETDFVARNDAFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_RHORT (Elongation factor Ts OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tsf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 L+K LREQT A M D K AL + D+EAA+ LRK+G A+KK+ RTA+EGL+ +A + AV+E+N ETDFV+RN+ FQ Sbjct: 8 LVKSLREQTGAGMMDCKKALTETAGDVEAAIDWLRKKGLAAAAKKAGRTASEGLVGIATAGTAGAVVEVNAETDFVARNDTFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_SINMW (Elongation factor Ts OS=Sinorhizobium medicae (strain WSM419) GN=tsf PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 ++K+LRE+T A M D K AL + + D+EAA+ LR +G A KKS RTA EGL+ +A +KA V+E+N ETDFV+RN+ FQ Sbjct: 7 MVKELREKTGAGMMDCKKALAETNGDMEAAIDWLRAKGIAKADKKSGRTAAEGLIGIASAGAKAVVVEINSETDFVARNDAFQ 89
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_MYCAP (Elongation factor Ts OS=Mycoplasma agalactiae (strain PG2) GN=tsf PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 313 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIF 570 +++ LIK+LRE+T+A M D K AL +WD+E A+ L+K GK+ A+ K++R + +GLL A N +A ++ELNCETDFV+ E F Sbjct: 2 DKMALIKELRERTAAGMSDCKKALEVSNWDVEEAISFLKKNGKIKAASKANRISADGLLVEAGNNERAVLVELNCETDFVAHGEEF 87
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_GRABC (Elongation factor Ts OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tsf PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 L+K+LRE T A M D K AL + + D+EAA+ LRK+G A+KKS R A EGL+ +A AA++E+N ETDFV+RNE+FQ Sbjct: 8 LVKELRETTGAGMMDCKKALSETNGDLEAAIDWLRKKGLSAAAKKSGRVAAEGLVGVASAPQTAAMVEVNAETDFVARNELFQ 90
BLAST of CN182008 vs. ExPASy Swiss-Prot
Match: EFTS_RHISN (Elongation factor Ts OS=Rhizobium sp. (strain NGR234) GN=tsf PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 325 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 573 ++K LRE+T A M D K AL + + D+EAA+ LR +G A KKS RTA EGL+ +A +KA V+E+N ETDFV+RN+ FQ Sbjct: 7 MVKDLREKTGAGMMDCKKALAETNGDMEAAIDWLRAKGIAKADKKSGRTAAEGLIGIASAGNKAVVVEINSETDFVARNDAFQ 89 The following BLAST results are available for this feature:
BLAST of CN182008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182008 ID=CN182008; Name=CN182008; organism=Citrus sinensis; type=EST; length=689bpback to top |