FC921837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.732e-20 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 3 Query: 54 RE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 RE + T GPVLIH VTEKG+GYP AE AAD+ HGV KFDP TGKQFK+ + TL+YT Sbjct: 341 REVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYT 398 HSP 2 Score: 34.6538 bits (78), Expect = 2.732e-20 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GPVD HN++DL+TI + V+ Sbjct: 324 YIGPVDGHNIDDLITILREVK 344
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.315e-19 Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 54 RE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 +E T GPVLIH VTEKG+GYP AE AAD+ HGV KFDP TGKQFK + T +YT Sbjct: 344 KEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQSYT 401 HSP 2 Score: 34.2686 bits (77), Expect = 8.315e-19 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GPVD HN++DL++I + VR Sbjct: 327 YIGPVDGHNIDDLISILKEVR 347
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.406e-18 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 3 Query: 54 RE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 +E + T GPVLIH VTEKG+GYP AE A D+ HGVVKFDP TG+QFKT + T +YT Sbjct: 345 KEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYT 402 HSP 2 Score: 33.113 bits (74), Expect = 1.406e-18 Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVR 64 Y+GPVD HN++DLV I + V+ Sbjct: 328 YIGPVDGHNIDDLVAILKEVK 348
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.678e-16 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GP+L+H VT+KGKGYPPAEA+AD+ HGVVKFD TG Q K KS +YT Sbjct: 274 GPILVHVVTQKGKGYPPAEASADKYHGVVKFDVVTGAQVKAKSNAPSYT 322 HSP 2 Score: 30.0314 bits (66), Expect = 2.678e-16 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN+E L+ + + VR+ Sbjct: 249 YVGPIDGHNLEHLLPVLKNVRD 270
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.832e-15 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 42 LPSFRE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 LP + + P GPVL+H VT KGKGY PAEA++D+ HGV FD TGKQ KT+S L YT Sbjct: 263 LPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQSNALAYT 323 HSP 2 Score: 29.6462 bits (65), Expect = 2.832e-15 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN++ L+ + + VRE Sbjct: 250 YVGPIDGHNLKHLLPVLKNVRE 271
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.679e-15 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVLIH VT+KGKGYPPAEAAAD+ HGV KFD TG Q K+ + +YT Sbjct: 288 GPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKSPAGAPSYT 336 HSP 2 Score: 29.6462 bits (65), Expect = 3.679e-15 Identity = 10/23 (43.48%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVREN 70 ++GP+D H++E LV + + VR+N Sbjct: 263 HIGPIDGHDLEALVPVLRNVRDN 285
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.782e-15 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GP+L+H VT+KGKGY PAEA+AD+ HGVVKFD TG Q K KS +YT Sbjct: 274 GPILVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKSNAPSYT 322 HSP 2 Score: 28.8758 bits (63), Expect = 4.782e-15 Identity = 9/22 (40.91%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN++ L+ + + VR+ Sbjct: 249 YVGPIDGHNLDHLLPVLKNVRD 270
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.215e-15 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVL+H VT KGKGYPPAEA++D+ HGV +FD TGKQ K S L YT Sbjct: 275 GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNILPYT 323 HSP 2 Score: 28.4906 bits (62), Expect = 6.215e-15 Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN+ L+ + + VRE Sbjct: 250 YVGPIDGHNLGHLLPVLKNVRE 271
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_BARHE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae GN=dxs PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.074e-15 Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 3 Query: 42 LPSFRE*EKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 LP + + PT GPVLIH VT KGKGY PAEA+ D+ HGV +FD TGKQ K S L YT Sbjct: 263 LPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEASLDKYHGVNRFDIITGKQVKASSNVLPYT 323 HSP 2 Score: 29.6462 bits (65), Expect = 8.074e-15 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN++ L+ + + VRE Sbjct: 250 YVGPIDGHNLKHLLPVLKNVRE 271
BLAST of FC921837 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.074e-15 Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTY 224 GP LIH VT+KGKGY PAEAAAD+ H VVKFD TG Q KTKS +Y Sbjct: 276 GPFLIHVVTQKGKGYAPAEAAADKYHAVVKFDIATGTQAKTKSNAPSY 323 HSP 2 Score: 30.8018 bits (68), Expect = 8.074e-15 Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YLGPVDRHNVEDLVTIFQRVRE 67 Y+GP+D HN++ L+ I Q VR+ Sbjct: 251 YVGPIDGHNLDHLLPILQNVRD 272 The following BLAST results are available for this feature:
BLAST of FC921837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921837 ID=FC921837; Name=FC921837; organism=Citrus sinensis; type=EST; length=229bpback to top |