CN181961
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS33_ARATH (40S ribosomal protein S3-3 OS=Arabidopsis thaliana GN=RPS3C PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.810e-38 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = -3 Query: 257 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 562 +MESGAKGCEVI GKL A RAKSMKFK+GYMV SGQP EYID AVRHV LRQGVLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T Sbjct: 126 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS31_ARATH (40S ribosomal protein S3-1 OS=Arabidopsis thaliana GN=RPS3A PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.414e-37 Identity = 75/104 (72.12%), Postives = 81/104 (77.88%), Query Frame = -3 Query: 251 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 562 +MESGAKGCEVI GKL A RAKSMKFK+GYMV SGQP EYID AVRHV LRQGVLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ Y P A + Sbjct: 126 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPV 229
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS32_ARATH (40S ribosomal protein S3-2 OS=Arabidopsis thaliana GN=RPS3B PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37 Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = -3 Query: 260 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 562 +MESGAKGCEVI GKL A RAKSMKFK+GYMV SGQP EYID AVRHV LRQGVLGIKVK+ML WDP G GP TPLPD+V IHSPK+EE P VA Sbjct: 126 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVA 226
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_RAT (40S ribosomal protein S3 OS=Rattus norvegicus GN=Rps3 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.655e-31 Identity = 66/91 (72.53%), Postives = 72/91 (79.12%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_MOUSE (40S ribosomal protein S3 OS=Mus musculus GN=Rps3 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.655e-31 Identity = 66/91 (72.53%), Postives = 72/91 (79.12%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.655e-31 Identity = 66/91 (72.53%), Postives = 72/91 (79.12%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS31_XENLA (40S ribosomal protein S3-A OS=Xenopus laevis GN=rps3-A PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.655e-31 Identity = 66/91 (72.53%), Postives = 72/91 (79.12%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_PIG (40S ribosomal protein S3 OS=Sus scrofa GN=RPS3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN181961 vs. ExPASy Swiss-Prot
Match: RS3_HUMAN (40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 290 IMESGAKGCEVIFRGKLGAQRAKSMKFKEGYMVFSGQPGNEYIDFAVRHVFLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 562 IMESGAKGCEV+ GKL QRAKSMKF +G M+ SG P N Y+D AVRHV LRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 126 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216 The following BLAST results are available for this feature:
BLAST of CN181961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181961 ID=CN181961; Name=CN181961; organism=Citrus sinensis; type=EST; length=564bpback to top |