CN181953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181953 vs. ExPASy Swiss-Prot
Match: PR1A1_ARATH (PRA1 family protein A1 OS=Arabidopsis thaliana GN=PRA1A1 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.403e-77 Identity = 127/175 (72.57%), Postives = 140/175 (80.00%), Query Frame = 2 Query: 68 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAVGLL 592 MDWGNVT +DL DALREVDWSSPPRP SEFFSRFTVP+S KW+SRLKCNLYYYRTNYFIMI VILGLG L RP+ FLNDSFAG+F+EK TRTVR+FSP LAAKMRPPLTPV RGRPS+KRAI++CG+PRWVFVL S VSF LWY+S GLL V AL + L Sbjct: 1 MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPPLTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHL 175 HSP 2 Score: 40.4318 bits (93), Expect = 4.403e-77 Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 1 Query: 625 PNLKARLNTFREEFRAVW 678 PNLKAR NTFREEFRAVW Sbjct: 186 PNLKARFNTFREEFRAVW 203 HSP 3 Score: 28.8758 bits (63), Expect = 4.403e-77 Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 576 LLLDFFATILHASFRTPQLES 638 LL+ ATILHAS RTP L++ Sbjct: 170 LLIAHLATILHASLRTPNLKA 190
BLAST of CN181953 vs. ExPASy Swiss-Prot
Match: PR1A3_ARATH (PRA1 family protein A3 OS=Arabidopsis thaliana GN=PRA1A3 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.678e-66 Identity = 108/175 (61.71%), Postives = 130/175 (74.29%), Query Frame = 2 Query: 68 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAVGLL 592 MDW +V AED+I+ALREV+WS+ PR L+EFFSRF PRS +KW SRLKCNLYYYRTNYFI+ +LGL + RP+ FLNDSFA TFNEK+ RT+R FSPHLAAKMRPP PVIRGR + ++ +YICG+PR VFVL+ SF+LW+ SCGLL VL+AL LL Sbjct: 1 MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFILFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPPHMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALL 175 HSP 2 Score: 41.9726 bits (97), Expect = 4.678e-66 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 1 Query: 625 PNLKARLNTFREEFRAVW 678 PNLKARLNTFREEFRAVW Sbjct: 186 PNLKARLNTFREEFRAVW 203
BLAST of CN181953 vs. ExPASy Swiss-Prot
Match: PR1A2_ARATH (PRA1 family protein A2 OS=Arabidopsis thaliana GN=PRA1A2 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61 Identity = 105/174 (60.34%), Postives = 129/174 (74.14%), Query Frame = 2 Query: 68 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAVGL 589 MDW NV AED+I+ALREV+WS+PPR EFFSRF PRS +KW SRLKCNLYYYRTNYFI++ +LGL + RP+ FLNDSFA +FNEK RT+R FSPH+AAKMRPP PVIRGR +A++ +Y+CG+PRWVFV+ F S ++W+ SCGLL VL+AL L Sbjct: 1 MDWDNVAAEDVIEALREVEWSTPPRSFGEFFSRFAFPRSFSKWKSRLKCNLYYYRTNYFILVIFVLGLALVTRPLALVGAALTALSIAFLNDSFAASFNEKFIRTIRHFSPHMAAKMRPPHMPVIRGRSTARKTVYVCGKPRWVFVITFLTASLVMWFSSCGLLWVLYALLTSL 174 The following BLAST results are available for this feature:
BLAST of CN181953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181953 ID=CN181953; Name=CN181953; organism=Citrus sinensis; type=EST; length=678bpback to top |