CN181936

Overview
NameCN181936
Unique NameCN181936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:26..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 289.656 bits (740), Expect = 9.505e-78
Identity = 149/180 (82.78%), Postives = 158/180 (87.78%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAG----ASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKVEAKN LENYAYNMRNTI+DEKI  KLPAADKKKIED+IEQAIQWL+GNQLAEADEFEDKMKELE ICNPIIAKMYQG GG+AG    + MD+D           PKIEEVD
Sbjct:  474 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDD--APPASGGAGPKIEEVD 651          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 1.793e-76
Identity = 147/181 (81.22%), Postives = 158/181 (87.29%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG-GGDAG----ASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQI VCFDIDANGILNVSAEDKTTG+KNKITITNDKGRLSKE+IEKMVQEAEKYK+ED+EHKKKVEAKN LENYAYNMRNTI+DEKI  KLPAADKKK+ED+IE+AIQWLDGNQL EADEFEDKMKELE +CNPIIAKMYQGG GG+AG    + MDED           PKIEEVD
Sbjct:  474 PRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDED-EAPPASGGAGPKIEEVD 653          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.517e-75
Identity = 144/176 (81.82%), Postives = 152/176 (86.36%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PR VPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKVEAKN LENYAYNMRNT+KDEKI +KL + DKKKIEDA++QAI WL+ NQLAE DEFEDKMKELEGICNPIIAKMYQG GGDAG  MD+D           PKIEEVD
Sbjct:  476 PRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDD-APPSGGSSAGPKIEEVD 650          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 280.411 bits (716), Expect = 5.766e-75
Identity = 135/158 (85.44%), Postives = 146/158 (92.41%), Query Frame = -2
Query:  195 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDED 668
            PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVE+KN LENYAYNMRN +KDEKI AKL  ADKKKIE+AI+ +IQWLDGNQLAEADEF+DKMKELE ICNPIIAKMYQG GGD G  M+++
Sbjct:  474 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGMEDE 631          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 9.836e-75
Identity = 143/176 (81.25%), Postives = 151/176 (85.80%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQI VCFDIDANG LNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVEAKN LENYAYNMRNTIKDEKI++KL A D+ KIEDAIEQAIQWLDGNQLAEA+EFEDKMKELE +CNPIIAKMYQG GGD      +D           PKIEEVD
Sbjct:  474 PRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQGAGGDM-----DDEGPAPSGGGAGPKIEEVD 644          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.882e-74
Identity = 144/180 (80.00%), Postives = 156/180 (86.67%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDED----XXXXXXXXXXXPKIEEVD 668
            PRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIE+MVQEAEKYK+ED+E KKKVEAKN LENYAYNMRNTIKD+KI+++L AADKK+IEDAI++AI+WLD NQLAEADEFEDKMKELE ICNPIIAKMYQGG G  GA+MDED               PKIEEVD
Sbjct:  474 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGAG--GATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.423e-73
Identity = 142/178 (79.78%), Postives = 150/178 (84.27%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG--GGDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKV+AKN LENYAYNMRNTI+DEKI  KL   DKKKIED+IE AI+WL+ NQLAE DEFEDKMKELE ICNPIIAKMYQGG  GG A   MDED           PKIEEVD
Sbjct:  474 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDED--VPPSAGGAGPKIEEVD 649          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 2.268e-71
Identity = 137/176 (77.84%), Postives = 146/176 (82.95%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQI V FDID N ILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKV+AKN LENYAYNMRNTIKD+KI++KLPA DKKKIEDA++ AI WLD NQLAE +EFEDKMKELEGICNPIIAKMY G G   GA+   D           PKIEEVD
Sbjct:  470 PRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.065e-69
Identity = 133/176 (75.57%), Postives = 143/176 (81.25%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGGDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQ+NVCFDIDANGILNVSAEDKT G KNKITITNDKGRLSKEEIEKMV++AE+YKAED+E KKKVEAKN LENYAYNMRNTIKDEKI  KL   +K+KIE A+E AIQWL+GNQ+AE DEFEDK KELEGICNPIIAKMYQG  G  G   D             PKIEEVD
Sbjct:  473 PRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQGAAGPGG---DVPMGADMPAAGAGPKIEEVD 645          
BLAST of CN181936 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.273e-63
Identity = 126/180 (70.00%), Postives = 140/180 (77.78%), Query Frame = -2
Query:  141 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG----GDAGASMDEDXXXXXXXXXXXPKIEEVD 668
            PRGVPQINV FDIDANGILNV AEDKT G KNKITITND GRLSK+EIEK+V+EAEKYKAED+E KKKVEAKN LENYAYNMRNTIKD+KI  KL A DK+KIE A+ +AI+WL+ NQLAE DE EDK+KELEG+CNPIIA++YQG G    G  G                 PKIEEVD
Sbjct:  476 PRGVPQINVVFDIDANGILNVFAEDKTAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGRGDVPIGGPGDMPGGGYGGSRGSSGAGPKIEEVD 655          
The following BLAST results are available for this feature:
BLAST of CN181936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH9.505e-7882.78Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH1.793e-7681.22Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC1.517e-7581.82Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7E_SPIOL5.766e-7585.44Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC9.836e-7581.25Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY4.882e-7480.00Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH2.423e-7379.78Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE2.268e-7177.84Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN8.065e-6975.57Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA2.273e-6370.00Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181936 ID=CN181936; Name=CN181936; organism=Citrus sinensis; type=EST; length=669bp
CCCTTTTTTAAACTAATATCTTTATGCAGACACCAGGAAACAGTTTTATA
TGTAACATAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCC
CTAATCATTAACCAACATTAAGCATAAATCCTCAAATTTAATCCACCTCC
TCAATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTC
ATCCATACTTGCACCAGCATCACCTCCACCTCCTTGGTACATCTTGGCAA
TAATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCA
TCTGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTGCTCAAT
GGCATCTTCAATTTTCTTCTTGTCAGCAGCAGGAAGCTTTGCGCTGATCT
TTTCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGACCA
TTCTTCGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTT
TTCTGCCTCTTGTACCATCTTCTCTATCTCCTCCTTAGAGAGTCTGCCCT
TGTCATTTGTGATGGTAATCTTATTCTTCTGTCCGGTGGTTTTGTCCTCA
GCAGAAACGTTCAAGATACCATTAGCATCAATGTCAAAGCACACATTGAT
TTGTGGAACCCCTCTTGGA
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