CX675883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB21_ORYSJ (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 4.716e-109 Identity = 185/216 (85.65%), Postives = 203/216 (93.98%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWSS+GEYA+RE +FQEK+++RPTFSAERI+GG LLAMCS+DFICFYDWA+CRLIRRIDV VKNLYWADSGDLVAIASDTSFYILKYNRDVV++YL+SGKPVDE+GVEDAFELLHE NERVRTG+WVGDCFIYNNSSWRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGD+ERAN+IL Sbjct: 396 VWSSEGEYAIRESTSRIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDVNVKNLYWADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANDIL 611
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2) HSP 1 Score: 387.882 bits (995), Expect = 2.588e-107 Identity = 183/216 (84.72%), Postives = 200/216 (92.59%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWSSDGE+AVRE NFQEK++VRPTFSAE I+GGTLL MCS+DFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILK+NRD+VS+Y D GK +DE+G+EDAFELL+ETNERVRTGLWVGDCFIY NSSWRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNV+GYTLLLSLIEYKTLVMRGDLE+ANE+L Sbjct: 395 VWSSDGEHAVRESSTKIKIFSKNFQEKKTVRPTFSAEHIFGGTLLTMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMRGDLEQANEVL 610
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB23_ARATH (Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 4.132e-105 Identity = 176/216 (81.48%), Postives = 202/216 (93.52%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWSS+GE AVRE NFQE++S+RPTFSAE+I+GGTLLAMCSNDFICFYDWAECRLI++IDVTVKNLYWA+SGDLVAIASDTSFYILKYNR++VS++ DSG+P DE+GVEDAFE+LHE +ERVRTG+WVGDCFIYNNSSW+LNYCVGGEVTTM+HLDRPMYLLGY+A+QSRVYL+DKEFNV+GYTLLLSLIEYKTLVMRGDL+RAN+IL Sbjct: 396 VWSSEGECAVRESSSKIKIFSKNFQERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVTVKNLYWAESGDLVAIASDTSFYILKYNRELVSSHFDSGRPTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNSSWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDRANQIL 611
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 7.048e-105 Identity = 177/216 (81.94%), Postives = 202/216 (93.52%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWSS+GE AVRE NFQEKRS+RPTFSAE+I+GGTLLAMCS+DFICFYDWAECRLI+RIDVTVKNLYWADSGDLVAIASDTSFYILK+NRD+V+++ DSG+P +E+GVEDAFE+LHE +ERVRTG+WVGDCFIYNNSSW+LNYCVGGEVTTM+HLDRPMYLLGYLASQSRV+L+DKEFNV+GYTLLLSLIEYKTLVMRGDL++A+EIL Sbjct: 396 VWSSEGECAVRESSSKIKIFSKNFQEKRSIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAIASDTSFYILKFNRDLVTSHFDSGRPTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNSSWKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKASEIL 611
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2) HSP 1 Score: 360.147 bits (923), Expect = 5.779e-99 Identity = 172/216 (79.63%), Postives = 191/216 (88.43%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWS DGEYAVRE NFQE++S+RP FSAERI+GG LLAMC+NDFICF+DWAE R+IRRIDV VKNLYWADSGDLV IASDTSFYILKYNRDVVS++LD G V E+GVEDAFELLHE NER+RTGLWVGDCFIYNNSS RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVMRGD +RAN +L Sbjct: 396 VWSLDGEYAVRESTSRIKIYSKNFQERKSIRPPFSAERIFGGVLLAMCTNDFICFHDWAEGRMIRRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNSSSRLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALL 611
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 5.779e-99 Identity = 172/216 (79.63%), Postives = 191/216 (88.43%), Query Frame = 1 Query: 1 VWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VWS DGEYAVRE NFQE++S+RP FSAERI+GG LLAMC+NDFICF+DWAE R+IRRIDV VKNLYWADSGDLV IASDTSFYILKYNRDVVS++LD G V E+GVEDAFELLHE NER+RTGLWVGDCFIYNNSS RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVMRGD +RAN +L Sbjct: 396 VWSVDGEYAVRESTSRIKIYSKNFQERKSIRPPFSAERIFGGVLLAMCTNDFICFHDWAEGRMIRRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNSSSRLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALL 611
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COPB2_DICDI (Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.178e-59 Identity = 110/218 (50.46%), Postives = 154/218 (70.64%), Query Frame = 1 Query: 1 VWSSD-GEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTV-KNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 VW+ D G+YAVRE NF+E S +P+FSAE I+GG+LL + SND +CFY W +IRRI+ T KN++W+++GD +AI +D S +IL+Y +D V Y++SG+P+ E G+E+AF+++HE + + TGLWVGDCFIY N S +LNYCVG EV T+ HL++ MYLL YL R+YL DK N++ Y L +S+I Y+T ++RGDLE A IL Sbjct: 396 VWAEDSGQYAVRESTSRIKIFK-NFKETHSFKPSFSAEGIFGGSLLGVKSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDYLAIVTDKSTFILRYYKDTVQKYIESGQPIGELGIENAFDVVHEIEDTIGTGLWVGDCFIYINRSSKLNYCVGTEVVTISHLEKHMYLLKYLPQSGRLYLSDKNLNIVSYKLHISVISYQTSILRGDLEGAERIL 612
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COPB2_RAT (Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3) HSP 1 Score: 225.328 bits (573), Expect = 2.222e-58 Identity = 112/216 (51.85%), Postives = 153/216 (70.83%), Query Frame = 1 Query: 4 WSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 W+ D EYA+RE NF+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++L Sbjct: 396 WAHDSSEYAIRESNSVVKIFK-NFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVL 610
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COPB2_PONAB (Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.222e-58 Identity = 112/216 (51.85%), Postives = 153/216 (70.83%), Query Frame = 1 Query: 4 WSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 W+ D EYA+RE NF+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++L Sbjct: 396 WAHDSSEYAIRESNSIVKIFK-NFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAVQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVL 610
BLAST of CX675883 vs. ExPASy Swiss-Prot
Match: COPB2_MOUSE (Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.222e-58 Identity = 112/216 (51.85%), Postives = 153/216 (70.83%), Query Frame = 1 Query: 4 WSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 648 W+ D EYA+RE NF+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++L Sbjct: 396 WAHDSSEYAIRESNSIVKIFK-NFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVL 610 The following BLAST results are available for this feature:
BLAST of CX675883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675883 ID=CX675883; Name=CX675883; organism=Citrus sinensis; type=EST; length=669bpback to top |