CX675879

Overview
NameCX675879
Unique NameCX675879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.278e-69
Identity = 133/183 (72.68%), Postives = 146/183 (79.78%), Query Frame = -2
Query:  192 VSFLACPTELIKCRLQAQSALAGSG---QVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 731
            VSFLACPTELIKCRLQAQ ALAG+     V  AVKYGGP+DVA+ VLRSEGG RGLFKGL PT AREVPGNA MF  YE  K+++AGG DTS               A FW  VYPTDVVKSV+QVDDYKNP+++GS+DAF+KILKSEGVKGLYKGF PAMARSVPANAACFLAYE+TRSSLG
Sbjct:  118 VSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPTFAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVYPTDVVKSVLQVDDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: ORNT1_MOUSE (Mitochondrial ornithine transporter 1 OS=Mus musculus GN=Slc25a15 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27
Identity = 68/175 (38.86%), Postives = 91/175 (52.00%), Query Frame = -2
Query:  204 SFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTR 728
            + + CPTEL+KCRLQ    +  SG++  A        V K + R +G L G + GL  T+ REVPG    FG YEL + + A G+   +               C W +VYP D +KS IQV      K +G +  F  I+K+EG+  LY G  P M R+ PAN A FLAYE +R
Sbjct:  121 ALVLCPTELVKCRLQTMYEMETSGKI--AASQNTVWSVVKEIFRKDGPL-GFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTG-KQTGLVRTFLSIVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSR 291          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: ORNT1_HUMAN (Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27
Identity = 69/175 (39.43%), Postives = 92/175 (52.57%), Query Frame = -2
Query:  204 SFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTR 728
            + + CPTEL+KCRLQ    +  SG++  A        V K +LR +G L G + GL  T+ REVPG    FG YEL + + A G+   +               C W +VYP D +KS IQV      K +G I  F  ++K+EG+  LY G  P M R+ PAN A FLAYE +R
Sbjct:  121 ALVLCPTELVKCRLQTMYEMETSGKI--AKSQNTVWSVIKSILRKDGPL-GFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGVGGICLWLAVYPVDCIKSRIQVLSMSG-KQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSR 291          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.891e-27
Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = -2
Query:  204 VSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTS--QXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDY--KNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTR 731
            + F+  P +L K ++Q Q         G   +Y    D AK++ +  GG+RG+F+GL  T+ R++P NA  FG YEL + ++A   + S  Q                +W   YP DVVKS +Q D       K+   ID   KI K +G+ G YKGFTP   RSVPANAACF+ YE  R
Sbjct:  126 IGFVDAPVDLFKSQMQVQQ--------GDKNQYKSTADCAKQIWKV-GGVRGVFQGLGATLVRDIPANACYFGAYELCRDFLASKDNISVNQLSSLQIMAAGGAGGVSYWTLTYPADVVKSTMQTDAIVKSQRKYKNMIDCASKIYKQQGIAGFYKGFTPCFIRSVPANAACFVLYEKAR 296          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26
Identity = 69/183 (37.70%), Postives = 94/183 (51.37%), Query Frame = -2
Query:  192 SFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQ----DTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 728
            S +  P EL+KCRLQ Q+            KY G +D   ++L+ EGG+RG ++G  PT+ARE  GN A F  YE  K+Y    +    D  +                +W  +YP DV KS IQ+ +   P  S  +   K+I   EGVKGL++G+TP + RS PANAA F  YE+    LG
Sbjct:  113 SVVLTPVELVKCRLQVQTT--------GPQKYKGSLDCLVQILK-EGGIRGAYRGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLPALIISGGLGGMAYWTVLYPVDVAKSKIQISEGAGPSPS-IVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELVIKLLG 285          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: ORNT2_HUMAN (Mitochondrial ornithine transporter 2 OS=Homo sapiens GN=SLC25A2 PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23
Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = -2
Query:  195 CPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 716
            CPTEL+KCRLQ    +  SG++  A  +     V K +L+ +G L G + GL  T+ +EVPG    FG YEL + + A G+   +               C W  V+P D +KS IQV      K +G I     ++++EG+  LY G    M R++PAN A F+AYE +R  +
Sbjct:  125 CPTELVKCRLQTMYEMEMSGKI--AKSHNTIWSVVKGILKKDGPL-GFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYG-KQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMM 294          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFD_DICDI (Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum GN=mcfD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23
Identity = 63/197 (31.98%), Postives = 102/197 (51.78%), Query Frame = -2
Query:  195 VSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAG-------------GQDTSQXXXXXXXXXXXXXXAC----FWFSVYPTDVVKSVIQVD-DYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 731
            +S L  P +L+K +LQ Q    GS    V+++Y GP+DV ++ ++ +G ++G+FKG+  T  R++PG+A  F VYE +K+ +                 D S                C    FW S+YP DVVK+ IQ   D+  P+++  +    KI + EG+   ++GF+  + R+ P +A  FL YE TR+ L
Sbjct:  135 ISLLITPRDLVKSKLQVQCRPFGS--TNVSLQYKGPIDVIRQTIKRDG-IKGMFKGIRSTFCRDIPGDAVYFVVYEFMKRKLLALSKNNNNNNNNNDNNDNSSPKAGVPAWVAIGAGGCAGMSFWMSIYPMDVVKTRIQTQPDHLPPQYTSVLQTITKIYREEGISVFFRGFSATILRAFPTSAVNFLMYETTRNLL 328          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: YMC2_YEAST (Carrier protein YMC2, mitochondrial OS=Saccharomyces cerevisiae GN=YMC2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23
Identity = 70/181 (38.67%), Postives = 93/181 (51.38%), Query Frame = -2
Query:  192 SFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYE-LVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSID-AFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 728
            SFLA P E I+ RLQ Q++  G  +      + GP D  K+ L+++GGL    +GL PTM R   G    F VYE LV + +  G   ++                 W +VYP DVVKS+IQ DD + PK+  SI    K I   EG++  +KGF P M RS P N A FL +E+    LG
Sbjct:  157 SFLASPIEQIRIRLQTQTSNGGDRE------FKGPWDCIKK-LKAQGGL---MRGLFPTMIRAGHGLGTYFLVYEALVAREIGTGLTRNEIPPWKLCLFGAFSGTMLWLTVYPLDVVKSIIQNDDLRKPKYKNSISYVAKTIYAKEGIRAFFKGFGPTMVRSAPVNGATFLTFELVMRFLG 327          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 63/175 (36.00%), Postives = 93/175 (53.14%), Query Frame = -2
Query:  213 VSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKN--PKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYE 731
            VSF+ACP E +K +LQ Q         GV + Y GP+D  K++     G+RGL+K L+PT  +      A FG YEL ++Y+   ++                   FW + +P DV++S I    Y    P++ G ID  K I + +G+KG +KGF+P + R+ PAN A F+AYE
Sbjct:  119 VSFVACPIETVKSKLQVQ-------YTGVKL-YNGPIDCIKKI-----GIRGLYKALIPTGFQR-NSLYAYFGCYELAQRYLR--REDGSMTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTMPYNESPPRYKGMIDCAKHIYRVDGLKGFWKGFSPCLLRTFPANGATFVAYE 277          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.380e-21
Identity = 60/170 (35.29%), Postives = 87/170 (51.18%), Query Frame = -2
Query:  207 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQV-DDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVT 713
            P E IKC LQ Q A    G  G  V Y GP+DV K++ + +GG+  +++G   T+ R++P +AA   VYE +K+  +G                       W    P DV+KS +Q   + K P   G     +++L+ EG + L+KGF P M R+ PANAACF   E+T
Sbjct:  124 PGERIKCLLQVQQA----GSAGSGVHYDGPLDVVKKLYK-QGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEGAQRTLSPGATLMAGGLAGIANWGVCIPADVLKSRLQTAPEGKYP--DGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGLELT 286          
The following BLAST results are available for this feature:
BLAST of CX675879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
MCAT_ARATH7.278e-6972.68Mitochondrial carnitine/acylcarnitine carrier-like... [more]
ORNT1_MOUSE4.040e-2738.86Mitochondrial ornithine transporter 1 OS=Mus muscu... [more]
ORNT1_HUMAN4.040e-2739.43Mitochondrial ornithine transporter 1 OS=Homo sapi... [more]
MCFG_DICDI6.891e-2737.78Mitochondrial substrate carrier family protein G O... [more]
MCFS_DICDI3.420e-2637.70Mitochondrial substrate carrier family protein S O... [more]
ORNT2_HUMAN1.216e-2335.63Mitochondrial ornithine transporter 2 OS=Homo sapi... [more]
MCFD_DICDI1.216e-2331.98Mitochondrial substrate carrier family protein D O... [more]
YMC2_YEAST2.075e-2338.67Carrier protein YMC2, mitochondrial OS=Saccharomyc... [more]
MCFL_DICDI5.111e-2236.00Mitochondrial substrate carrier family protein L O... [more]
DIF1_CAEEL7.380e-2135.29Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_65D12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-65D12-H23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675879 ID=CX675879; Name=CX675879; organism=Citrus sinensis; type=EST; length=732bp
TTTTCTCGTACCCAAATTAAACTTAAAAAGCTATCTTGAAGAATCAAAAG
ACCGTTACCATATTGCTAAACAATTTTTTACAGAGGCATCATTTGGTGAC
TGGAAGATGTCTTCGAAATAAGCAATATGATAAGTGCGGCTAATGATCAC
CCAAATCATTGGACACCAATCATGGAGCAATGAAACAATCATCCCAAACT
AGATCTTGTCACTTCATACGCCAAGAAGCATGCAGCATTTGCAGGAACAC
TTCTGGCCATGGCAGGGGTGAAACCCTTGTACAAGCCTTTGACACCTTCT
GATTTCAGGATCTTTTTGAAGGCATCAATGGAACCAGAGAATTTGGGATT
TTTGTAATCATCGACCTGAATAACACTCTTGACAACATCAGTGGGGTAAA
CAGAGAACCAGAAACAAGCTCCAGATAAACCACCTGCCAAAAGCACTGCT
CCTCTTCCCAACTGAGAGGTGTCTTGGCCTCCTGCCATATACTGTTTCAC
CAATTCATACACACCAAACATGGCAGCATTCCCTGGAACCTCACGTGCCA
TTGTGGGAACCAGGCCCTTGAAGAGACCCCTAAGACCGCCTTCTGATCTA
AGAACACGCTTAGCCACATCCACTGGTCCACCATACTTCACTGCCACACC
AACTTGGCCAGAACCTGCTAATGCACTTTGGGCTTGCAACCTGCATTTGA
TCAATTCTGTGGGGCAAGCAAGAAAAGAAACA
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