CN181869

Overview
NameCN181869
Unique NameCN181869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2289 contig Csv1_Contig2289:1..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.537e-39
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = 3
Query:   84 GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            G   +G+NYG +G++LP P +VV  L K  N  I  VRIF P+  VL AL  S L V LG  N DLA +A    Y  +WV  +V P+     G +  RYI AGNE+IPG  A  VLPAMKN++  L+   + +V V+T ++ + LG+SYPPS G+F+     T+  I   + S G PL++NVYPYF  ++DP
Sbjct:    3 GVEGIGVNYGMMGSDLPSPDKVVA-LYKANN--ITDVRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFA----GAVSFRYINAGNEVIPGESAALVLPAMKNLEAALQAAGL-SVPVTTAMATSVLGTSYPPSQGTFSEAALPTVGPIVSHLASSGTPLLVNVYPYFAYSADP 186          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.406e-33
Identity = 83/213 (38.97%), Postives = 127/213 (59.62%), Query Frame = 3
Query:   39 VMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP--GTEAV--YVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            ++LL + +S   +  GA +VG+ YG LGNNLPP ++VV+ L K  N  I  +R++DP    L AL  SN+ V LGV N DL  +A +     NWV+  V  +       +K RYI  GNE+ P  GT ++  Y+LPAM+NI+  +    + N + VS+ +    +G+S+PPS GSF  +V + ++ I  FV    +PL++N+YPYF+ A +P+
Sbjct:   15 IILLGLLVSSTEIV-GAQSVGVCYGMLGNNLPPASQVVQ-LYKSKN--IRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPA----VKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPR 219          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 6.552e-31
Identity = 76/216 (35.19%), Postives = 118/216 (54.63%), Query Frame = 3
Query:   27 MAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYV---LPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            ++I +  L + LSH   +     +G+NYG++ +NLPPP+  V+ L      +I  VR++  +P ++ ALA + + + +G  N D+  +A   +    W+   V P+        K+  IT GNEI+   +   V   LPAM+N+Q+ LE  ++   + VSTV S   LGSS PPS+GSFA    T L  I +F+   G+P  IN YP+F   SDP+
Sbjct:    3 LSISIYFLLIFLSHFPSSHAEPFIGVNYGQVADNLPPPSETVKLLQST---SIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPAS----KIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPR 211          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   99 GINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP-GTEAVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEV-ATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            G+ YGRLGNNLP P  VV    +     I  +RI+ P PEVL AL  SN+ + L + N +L  +A S D    WV++ +  Y       ++ RY++ GNE+ P  + A +++PA++NIQ+ +    + N V VST +   AL  S+PPS GSF ++     L+ + +F+ +  APLM+NVY YF   ++P+
Sbjct:   35 GVCYGRLGNNLPTPQEVVALYNQA---NIRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYA----NNVRFRYVSVGNEVKPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPK 218          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 3
Query:   27 MAIKVMLLAMALSHDSMAFGAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTE-AVYVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYF 641
            M + ++ L MA + D+ A   G +G+ +G++GNN+P P+ VV    +   Y+IP +R++ P P+ L+AL  SN+   L V N DL ++A S      WVR+ V  Y       ++ +YI+ GNE+ PG   A  ++ AM+NI + L    + N+ VST        ++YPPS G F  E    L  +  F+ +K +PL++N+Y YF
Sbjct:    7 MLLFLLSLLMAYNFDTTA---GQIGVCFGQMGNNIPNPSEVVAMFKQ---YSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQKYND-----VRFKYISVGNEVKPGEPGAAALIQAMQNIDRALSAAGLSNIKVSTTTFMGPSRNTYPPSRGRFKDEYRNFLQPVIGFLVNKRSPLLVNIYTYF 201          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 80/222 (36.04%), Postives = 122/222 (54.95%), Query Frame = 3
Query:   12 KMKTTMAIKVMLLAMALSHDSMAF-GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVL----PAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            K  T     + LL + L   S+   GA ++G+ YG LGNNLP    V++ L K  N  I  +R++DP    L AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P T   Y+     PAM NI + + +  + N + VST +    +G+SYPPS GSF  +    ++ I  F+    APL++N+YPYF+ + +P
Sbjct:    6 KHNTPQMAAITLLGLLLVASSIEIAGAESIGVCYGMLGNNLPNHWEVIQ-LYKSRN--IGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNP 220          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 80/222 (36.04%), Postives = 122/222 (54.95%), Query Frame = 3
Query:   12 KMKTTMAIKVMLLAMALSHDSMAF-GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVL----PAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            K  T     + LL + L   S+   GA ++G+ YG LGNNLP    V++ L K  N  I  +R++DP    L AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P T   Y+     PAM NI + + +  + N + VST +    +G+SYPPS GSF  +    ++ I  F+    APL++N+YPYF+ + +P
Sbjct:    6 KHNTPQMAAITLLGLLLVASSIDIAGAQSIGVCYGMLGNNLPNHWEVIQ-LYKSRN--IGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNP 220          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.595e-29
Identity = 80/222 (36.04%), Postives = 121/222 (54.50%), Query Frame = 3
Query:   12 KMKTTMAIKVMLLAMALSHDSMAF-GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVL----PAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            K  T     + LL + L   S+   GA ++G+ YG LGNNLP    V++ L K  N  I  +R++DP    L AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P T   Y+     PAM NI + + +  + N + VST +    +G+SYPPS GSF  +     + I  F+    APL++N+YPYF+ + +P
Sbjct:    7 KHNTPQMAAITLLGLLLVASSIDIAGAQSIGVCYGMLGNNLPNHWEVIQ-LYKSRN--IGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 221          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.696e-29
Identity = 72/194 (37.11%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   96 VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIP--GTE--AVYVLPAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQ 662
            +GI YG +GNNLPP   V+  L K  N  I  +R++DP    L+AL  S + + LG+ N DL  +A + D  R WV+  V  +      ++K++YI  GNE+ P  G+   A YVLPA +N+ Q +  + + + + V+T +    +G+S+PPS GSF ++V + L+    ++   GAPL++NVYPYF+   +P+
Sbjct:   34 IGICYGMMGNNLPPANEVIA-LYKANN--IKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYP----SVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSFRSDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPR 220          
BLAST of CN181869 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.133e-29
Identity = 79/222 (35.59%), Postives = 121/222 (54.50%), Query Frame = 3
Query:   12 KMKTTMAIKVMLLAMALSHDSMAF-GAGTVGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGNEIIPGTEAVYVL----PAMKNIQQVLEQENVPN-VGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDP 659
            K  T     + LL + L   ++   GA ++G+ YG LGNNLP    V++ L K  N  I  +R++DP    L AL  SN+ V LG+ N D+  +A  M++ R WV++ V  +       +K++YI  GNEI P T   Y+     PAM NI + + +  + N + VST +    +G+SYPPS GSF  +     + I  F+    APL++N+YPYF+ + +P
Sbjct:    6 KHNTPQMAAITLLGLLLVASTIEIAGAQSIGVCYGMLGNNLPNHWEVIQ-LYKSRN--IGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPD----VKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNP 220          
The following BLAST results are available for this feature:
BLAST of CN181869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
E13F_HORVU6.537e-3944.27Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
GUB_NICPL2.406e-3338.97Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E137_ARATH6.552e-3135.19Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13A_SOYBN4.247e-3037.70Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13B_BRACM7.244e-3034.95Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13B_NICPL1.614e-2936.04Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13E_TOBAC2.108e-2936.04Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC3.595e-2936.04Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_PEA4.696e-2937.11Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13F_TOBAC6.133e-2935.59Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001J15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181869 ID=CN181869; Name=CN181869; organism=Citrus sinensis; type=EST; length=664bp
GATACCATATCAAGATGAAGACCACAATGGCGATCAAGGTCATGCTGCTT
GCTATGGCTCTGTCTCACGATTCCATGGCATTCGGAGCTGGCACTGTTGG
CATCAATTATGGGAGACTTGGTAACAATCTCCCACCGCCAGCACGCGTAG
TCGAATTCCTGACGAAAGATCTTAATTATGCAATCCCATCGGTAAGGATA
TTTGATCCGGAACCCGAAGTCTTGAGTGCATTGGCCACATCAAACTTGAG
CGTATGCTTAGGGGTGAAAAATCAAGACCTTGCACAAATGGCCGGAAGCA
TGGACTACACACGAAATTGGGTTCGAGAATTTGTGACTCCATACACTAAA
GGCGGAAACGGAACCCTAAAACTCCGGTACATCACAGCCGGCAACGAGAT
TATCCCCGGCACCGAAGCCGTATATGTCCTGCCGGCCATGAAGAACATTC
AACAAGTACTAGAACAAGAAAATGTACCTAATGTCGGTGTATCAACTGTG
CTGTCAGCTGCTGCCCTAGGTTCCTCGTACCCACCATCAAACGGCTCATT
TGCTACTGAAGTGGCTACTACTTTGAATGAAATATCAAAATTTGTGTACT
CTAAAGGAGCTCCGTTGATGATCAATGTGTATCCTTATTTTACCCTAGCT
TCTGACCCTCAACA
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