CN181865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.706e-59 Identity = 109/133 (81.95%), Postives = 122/133 (91.73%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GMGVADHSK+T+LEL+RKKVHRYVIFKID KTGGPAES+D+F A+LP+NDCRYAVYDFDFVTSENCQKSKIFFIAWSPD SRIRAKMLYATSK+RFRRELDG+HYEIQATDP+EMDLEV+R+RA Sbjct: 10 SGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERA 142
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.280e-54 Identity = 101/133 (75.94%), Postives = 112/133 (84.21%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GMGVAD SK+T+LELQRKK HRYV+FKID KTG P ESYDDF ASLPDNDCRYAVYDFDFVTSENCQKSKIFF AWSP S IRAK+LY+TSKD+ REL GIHYEIQATDP+E+DLEV+R+RA Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERA 145
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.639e-52 Identity = 97/133 (72.93%), Postives = 112/133 (84.21%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +G+GVA K T+LELQRKK HRYVIFKID KTG ES+DDF SLP++DCRYA+YDFDFVT ENCQKSKIFF+AWSP VSRIRAKMLYATSK+RFRRELDG+HYEIQATDPSE+D+E++R+RA Sbjct: 12 SGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERA 144
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 94/133 (70.68%), Postives = 107/133 (80.45%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GMGVA + T+LELQ KK RYVIFKI+ KTG ESYDDF ASLP+NDCRYA+YDFDFVT EN QKSKIFFIAWSP SRIRAKMLY+TSKDR ++ELDG HYEIQATDP+E+DLEV+R+RA Sbjct: 12 SGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERA 144
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46 Identity = 88/129 (68.22%), Postives = 105/129 (81.40%), Query Frame = -3 Query: 302 VADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 688 V + SKS + EL+R+KVHRYVIFKID KTG P ESYDDFTASLP +DCRYAVYD DFV+ +NC+KSKIFFI+WSP VSRIRAK +YA S+++FR ELDG+H+EIQATDP +MDLEV+R RA Sbjct: 20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRA 148
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.550e-44 Identity = 81/132 (61.36%), Postives = 105/132 (79.55%), Query Frame = -3 Query: 305 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 700 +GM V D K +LEL+ K+ +R+++FKID K G P E+YDDFT+S+PD++CRYAVYDFDF T +NCQKSKIFFIAWSPD SR+R+KMLYA+SKDRF+RE++GI E+QATDPSEM L++I+ R Sbjct: 6 SGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.892e-44 Identity = 81/133 (60.90%), Postives = 105/133 (78.95%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GM V D K +LEL+ K+ HR++++KI+ K G P ESY+DF ASLP+N+CRYAVYDFDFVT+ENCQKS+IFFIAW PD +R+R+KM+YA+SKDRF+RELDGI E+QA DP+EM L+VI+ RA Sbjct: 6 SGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRA 138
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.892e-44 Identity = 81/132 (61.36%), Postives = 105/132 (79.55%), Query Frame = -3 Query: 305 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDR 700 +GM V+D K +LEL+ K+ +R+++FKID K G P E+Y+DFT S+P+++CRYAVYD+DF T ENCQKSKIFFIAWSPD SR+R+KMLYA+SKDRF+RELDGI E+QATDPSEM L++I+ R Sbjct: 6 SGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.005e-43 Identity = 80/133 (60.15%), Postives = 104/133 (78.20%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GM V D K +LEL+ K+ R+++FKI+ + G P ESYDDFTA LP ++CRYAV+DFDFVT ENCQKSKIFFI+W+PD SR+R+KMLYA+SKDRF+RELDGI E+QATDPSEM +++++ RA Sbjct: 6 SGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138
BLAST of CN181865 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.313e-43 Identity = 82/133 (61.65%), Postives = 104/133 (78.20%), Query Frame = -3 Query: 302 TGMGVADHSKSTYLELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 700 +GM V D K +LEL+ K+ +R++I+KID K G P +YDDF ASLP N+CRYA++D+DFVT ENCQKSKIFFIAWSPD SR+R+KM+YA+SKDRF+RELDGI E+QATDP+E+ L+VIR RA Sbjct: 6 SGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRA 138 The following BLAST results are available for this feature:
BLAST of CN181865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181865 ID=CN181865; Name=CN181865; organism=Citrus sinensis; type=EST; length=708bpback to top |