CN181856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.159e-34 Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 374 PNSESCRAETRSFLRGIDVNRLPSHAD-NEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 PNS+S + ETR+F+RGIDVNR PS A+ +E+ GKRSERE + D SRGISDDEDGD SRKKLRLSKDQSAILEE+FK+H+TLNPKQK ALAK Sbjct: 55 PNSDSSQKETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQG-----SRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAK 161 HSP 2 Score: 44.2838 bits (103), Expect = 3.159e-34 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 3 Query: 150 MAEKDDLGLSLSLSFPQNHHSLQLNLMPSSACSTSPSGFSL-QKTPWNEAL---FPPSDPS 320 M EKDDLGLSL L+FP+ +L+ N PS + + S S F L +++ WNE+ P SD S Sbjct: 2 MFEKDDLGLSLGLNFPKKQINLKSN--PSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDSS 60
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.151e-31 Identity = 62/113 (54.87%), Postives = 71/113 (62.83%), Query Frame = 2 Query: 407 SFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXX-GKRSERE----------PNGDELEMERACSRGISDDED--GDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 S LR IDVN PS + EE+ GKRSERE + DE+ +R SRG SD+E+ G+TSRKKLRLSKDQSA LEE+FKEHNTLNPKQKLALAK Sbjct: 50 SDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAK 162 HSP 2 Score: 57.7658 bits (138), Expect = 5.151e-31 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 3 Query: 150 MAEKDDLGLSLSLSFPQNHHSLQLNLMPSSACSTSPSGFSLQKTPWNEALFPPSD 314 M K+DLGLSLSL F QNH+ LQ+NL P+S+ S +LQ+ PWN+ P SD Sbjct: 2 MMGKEDLGLSLSLGFSQNHNPLQMNLNPNSSLSN-----NLQRLPWNQTFDPTSD 51
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.316e-28 Identity = 62/116 (53.45%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 398 ETRSFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXX-GKR--SEREPN-----GDELE--MERACSRGISDDED---GDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 + + FLR IDVN LP+ D EEE GKR +ERE GD+L+ ++R+ SRG SD+E+ G+T RKKLRLSKDQSA+LE++FKEHNTLNPKQKLALAK Sbjct: 52 QKQQFLRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAK 167 HSP 2 Score: 49.6766 bits (117), Expect = 1.316e-28 Identity = 31/55 (56.36%), Postives = 35/55 (63.64%), Query Frame = 3 Query: 150 MAEKDDLGLSLSLSFPQNHHSLQLNLMPSSACSTSPSGFSLQKTPWNEALFPPSD 314 M K+DLGLSLSL F QN H LQLNL P+S SP +LQ PWN+ L SD Sbjct: 2 MMGKEDLGLSLSLGFAQN-HPLQLNLKPTS----SPMS-NLQMFPWNQTLVSSSD 50
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 5.705e-22 Identity = 63/130 (48.46%), Postives = 78/130 (60.00%), Query Frame = 2 Query: 380 SESCRAETRSFLRGIDVNRLPS----HADNEEEXXXXXXXXXXXXXXGKRSEREPNG----------DELEMERA-CSRGI-SDDEDG-----DTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 S ++ RSFLRGIDVNR PS ++E GK+SERE ++ E+ERA CS G SDDEDG D+SRKKLRLSK+Q+ +LEE+FKEH+TLNPKQK+ALAK Sbjct: 65 SSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAK 194 HSP 2 Score: 32.3426 bits (72), Expect = 5.705e-22 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 150 MAEKDD-LGLSLSLS--FPQNHHSLQLNLMPSSACSTSPSGFSLQKTPWN 290 M+E+DD LGLSLSLS F Q S +LN MP ++ ++S +Q++ +N Sbjct: 1 MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYN 50
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 60/118 (50.85%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 395 AETRSFLRGIDVNRLPSHAD----NEEEXXXXXXXXXXXXXXGKRSEREP--NGDELEMERA-CSRGI----SDDEDG---DTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 ++ SFLRG +VNR S EE G + + GDE E ERA CSRG SDDEDG D SRKKLRLSKDQ+ +LEE+FKEH+TLNPKQKLALAK Sbjct: 78 SDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAK 195
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 410 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 FLRGIDVNR P S ++ +EE GKR A + SDDED G SRKKLRLSKDQ+A+LE++FKEHNTLNPKQK ALA+ Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALAR 189
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 410 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 FLRGIDVNR P S ++ +EE GKR A + SDDED G SRKKLRLSKDQ+A+LE++FKEHNTLNPKQK ALA+ Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALAR 189
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 554 ERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 +R+CSR SD++DG ++RKKLRLSK+QSA LEESFKEH+TLNPKQKLALAK Sbjct: 160 DRSCSRA-SDEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAK 209
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 554 ERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 +R+CSR SD++DG ++RKKLRLSK+QSA LEESFKEH+TLNPKQKLALAK Sbjct: 73 DRSCSRA-SDEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAK 122
BLAST of CN181856 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 57/131 (43.51%), Postives = 71/131 (54.20%), Query Frame = 2 Query: 380 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAK 706 SE+ R+E + RG DVNR PS A D+EE G + +G L ER+ SR SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNPKQK+ALAK Sbjct: 79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAK 206 The following BLAST results are available for this feature:
BLAST of CN181856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181856 ID=CN181856; Name=CN181856; organism=Citrus sinensis; type=EST; length=706bpback to top |