CN181847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.312e-92 Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = -3 Query: 149 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEATT 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NSHHAQEALRRAKFKFP RQKIIVSRKWGFTKF+R DY++WKS+NRI+PDGVNAKLLGCHGPLA RQPG+AF+ A T Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINACT 220 HSP 2 Score: 102.449 bits (254), Expect = 4.312e-92 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KYAGKDAFH Sbjct: 39 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 5.647e-89 Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = -3 Query: 152 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS+HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR DYL++KSENRIVPDGVNAKLLG HGPLA RQPGRAFL ++ Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219 HSP 2 Score: 97.8265 bits (242), Expect = 5.647e-89 Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 2.133e-88 Identity = 119/132 (90.15%), Postives = 126/132 (95.45%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NSH+AQEALRRAKFKFPGRQKIIVSRKWGFTK +RADY R KSENRI+PDGVNAKLLGCHG LA R+PGRAF++A Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDA 218 HSP 2 Score: 100.908 bits (250), Expect = 2.133e-88 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFH Sbjct: 39 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 1.054e-84 Identity = 114/132 (86.36%), Postives = 120/132 (90.91%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HHAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RADY + + E RIVPDGVNAK L CHGPLA RQPG AFL A Sbjct: 87 LRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218 HSP 2 Score: 96.6709 bits (239), Expect = 1.054e-84 Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.339e-84 Identity = 112/132 (84.85%), Postives = 120/132 (90.91%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HHAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+ + + E R+VPDGVNAK L CHGPLA RQPG AFL A Sbjct: 87 LRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 218 HSP 2 Score: 97.8265 bits (242), Expect = 2.339e-84 Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 8.828e-84 Identity = 112/131 (85.50%), Postives = 126/131 (96.18%), Query Frame = -3 Query: 158 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLE 550 LRVRVHPFHVLR NKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR +D++S+HAQEALRRAKFKFPGR+KIIV+RKWGFTK++RADYL+WK+ENRIVPDGVN KLLGC GPL+ R+PG+AFL+ Sbjct: 87 LRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRGPLSNRKPGQAFLK 217 HSP 2 Score: 92.8189 bits (229), Expect = 8.828e-84 Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KK+ VDEFPFCVHLVSWEKENVSSEALEA RIACNKYM K+AGKD FH Sbjct: 39 KKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 2.795e-82 Identity = 114/132 (86.36%), Postives = 121/132 (91.67%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSRADYL++KSE RIVPDGVNAKLL HG L +R PG+AFL+A Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHGRLEKRAPGKAFLDA 218 HSP 2 Score: 93.9745 bits (232), Expect = 2.795e-82 Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+KGVDEFP+CVHLVSWE+ENVSSEALEAARI CNKYM K AGKDAFH Sbjct: 39 KRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.055e-81 Identity = 110/134 (82.09%), Postives = 120/134 (89.55%), Query Frame = -3 Query: 149 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEATT 550 LR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK GTCARVAIGQVLLSVRCKD++ HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+Y + ++ RIVPDGVNAK L HGPLA RQPG AF+ AT+ Sbjct: 87 LRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISATS 220 HSP 2 Score: 97.8265 bits (242), Expect = 1.055e-81 Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 K+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFH Sbjct: 39 KRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.342e-81 Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EALRRAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218 HSP 2 Score: 92.0485 bits (227), Expect = 2.342e-81 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEF CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFH Sbjct: 39 KKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFH 86
BLAST of CN181847 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.342e-81 Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = -3 Query: 155 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEA 550 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK +N+ HA EALRRAKFKFPGRQKII SRKWGFTKFSR +Y+R KSE RI+PDGVNAKLLGCHG L+ R PG+AFL A Sbjct: 87 LRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA 218 HSP 2 Score: 92.0485 bits (227), Expect = 2.342e-81 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = -2 Query: 552 KKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFH 695 KKKGVDEF CVHLVSWEKENV+SEALEAARIACNKYM K AGKDAFH Sbjct: 39 KKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFH 86 The following BLAST results are available for this feature:
BLAST of CN181847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181847 ID=CN181847; Name=CN181847; organism=Citrus sinensis; type=EST; length=696bpback to top |