CN181813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181813 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 65.0846 bits (157), Expect = 4.119e-23 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = -1 Query: 267 FEILEYNFITLLCYFLCFIMITLFIWSK--AAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILA 503 FE++EY FIT LC L + IWS ++ LI PP+++++R+S+ LF +N + K YDIS G++ +L LA Sbjct: 57 FEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLA 137 HSP 2 Score: 63.929 bits (154), Expect = 4.119e-23 Identity = 29/57 (50.88%), Postives = 44/57 (77.19%), Query Frame = -3 Query: 109 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKIPRASAKEKK 279 LY F+ LET+P LY +++ E+ Y A+KS +DM++L N FNSKV++KIP+A AK ++ Sbjct: 157 LYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPKAQAKTRR 213
BLAST of CN181813 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.108e-17 Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = -1 Query: 270 EILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYIL 500 E++EYNFITL+C+ M+ FIWS A+ + P + E+ L + + S N +LTK D++CG + L+ L Sbjct: 66 EVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFL 146 HSP 2 Score: 52.7582 bits (125), Expect = 2.108e-17 Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = -3 Query: 106 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKIPRASAKEKKY 279 L+ GF+ ++TLP +Y ++ +VD A K + M++L+ ++ VL KIPR + K KK+ Sbjct: 167 LFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKKF 224
BLAST of CN181813 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 1.118e-12 Identity = 26/82 (31.71%), Postives = 43/82 (52.44%), Query Frame = -1 Query: 270 FEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYIL 503 FE+LEYN +TL + + LF+WS A+ I SP + E+ + + + + L +N T DI+ G +LK ++L Sbjct: 90 FELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLL 171 HSP 2 Score: 35.4242 bits (80), Expect = 1.118e-12 Identity = 14/48 (29.17%), Postives = 31/48 (64.58%), Query Frame = -3 Query: 136 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKI 279 +Y + L T+P LY +++ +VD K+ +++++ + +F+ KVL K+ Sbjct: 192 IYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239 HSP 3 Score: 29.261 bits (64), Expect = 1.118e-12 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 502 LWKNRNLSAAILVVVTVIWLLF 567 LW+N+ +S +L TV W+LF Sbjct: 69 LWRNKKVSGGVLGAATVSWILF 90 The following BLAST results are available for this feature:
BLAST of CN181813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181813 ID=CN181813; Name=CN181813; organism=Citrus sinensis; type=EST; length=572bpback to top |