CN181792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_TOBAC (60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64 Identity = 126/154 (81.82%), Postives = 132/154 (85.71%), Query Frame = 2 Query: 59 MAP-KVDSSKKGDPXXXXXXXXXXXXSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 MAP K D SKK DP SG T KKK++K+RT VTFHRPKTLKKDRNPKYPRISAP RNKLD Y ILKYPLTTESAMKKIEDNNTLVFIVDI+ADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_FRIAG (60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64 Identity = 126/154 (81.82%), Postives = 132/154 (85.71%), Query Frame = 2 Query: 59 MAPKVDSSKKGDPXXXXXXXXXXXXSG-PTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 MAP +KK D SG T +KKAKK+RTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIK AVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALD+ANKIGII Sbjct: 1 MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: R23A1_ARATH (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA PE=2 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.788e-63 Identity = 124/154 (80.52%), Postives = 131/154 (85.06%), Query Frame = 2 Query: 59 MAP-KVDSSKKGDPXXXXXXXXXXXXSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 M+P KVD++KK DP SG FKKK KK+RT VTFHRPKTL K R KYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_DAUCA (60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.514e-62 Identity = 124/154 (80.52%), Postives = 131/154 (85.06%), Query Frame = 2 Query: 59 MAP-KVDSSKKGDPXXXXXXXXXXXXSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 M+P KVD +KK D SG T KK KK+RTSVTFHRP+TL KDRNPKYPRISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+K+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: R23A2_ARATH (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.977e-62 Identity = 123/154 (79.87%), Postives = 129/154 (83.77%), Query Frame = 2 Query: 59 MAP-KVDSSKKGDPXXXXXXXXXXXXSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 M+P KVD +KK DP SG KK AKK+RT VTFHRPKTL R PKYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_RAT (60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 2 Query: 155 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_MOUSE (60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 2 Query: 155 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_HUMAN (60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 2 Query: 155 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL23A_BOVIN (60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 2 Query: 155 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN181792 vs. ExPASy Swiss-Prot
Match: RL25_PUCGR (60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41 Identity = 81/125 (64.80%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 143 TFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 517 T K +++RTSVTF RPKTL+ R PKYPR S P ++D Y+ L PL TESAMKKIEDNNTL+FIVD++A+KR+I DAVKK+Y++ +VNTLIRPDG KKA+VRLTP+ DALD+ANKIG I Sbjct: 34 TSSKTQRRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158 The following BLAST results are available for this feature:
BLAST of CN181792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181792 ID=CN181792; Name=CN181792; organism=Citrus sinensis; type=EST; length=678bpback to top |