CN181553

Overview
NameCN181553
Unique NameCN181553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6992 contig Csv1_Contig6992:973..1666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN181553 vs. ExPASy Swiss-Prot
Match: EXG_ASPOR (Glucan 1,3-beta-glucosidase OS=Aspergillus oryzae GN=exg1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 66/227 (29.07%), Postives = 95/227 (41.85%), Query Frame = -3 
Query:  131 VADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT-----CEWNVKG---------------------------------ASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 691
            V  T+   D LA RY    ++AAIE INEP  P GV    L+ YY + Y  V KY +   V+  +   P +      F +  S+VV+D H+Y++F N    +++  +ID V       L A   S+ P+  VGEWT     C   + G                                   + D +RF  AQLD +     GW +W  K E A  W +  ++E G
Sbjct:  171 VEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKYNAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFAHQHLEA---SDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLATGFVSKLSDEERSDMRRFIEAQLDAF-ELKSGWVFWTWKTEGAPGWDMSDLLEAG 390
The following BLAST results are available for this feature:
BLAST of CN181553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXG_ASPOR3.572e-1429.07Glucan 1,3-beta-glucosidase OS=Aspergillus oryzae ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181553 ID=CN181553; Name=CN181553; organism=Citrus sinensis; type=EST; length=693bp
GAGGGTTAAAATTTAAGACACAGCTTTTAGCTTTTACACTTGCGTATCTC
ATGATACCTTAAACCCACTGTTATTTATAATTAAAACAGAAACTGGTGAT
CATGATTAGACCCTAAACGAGCTTTATGTAGCCATTTTCGATCATCCATT
TGAGACTCCAGTGGTTCGCCTCACATTTATGAGCCCAATATGCCCATCCA
AATGTTGCTCGCCCATACACGTCAAGTTGAGCATTTGCAAATCTCTGGTA
ATCCTGCTTTGATGCGCCCTTTACATTCCATTCACATGTCCATTCCCCAA
CAAAAGTTAGAGGGCCATTAGAAGTAGTGACGGCGCCGAGATCAGAAGCT
CGTTGGTTGTTGACATAATCGATGTTCTGTTGCACATTCAAGCCATTGAA
ATTGTTGCTGAACAGATTGTAGTAATGCACATCAATGACTACGCGACTAA
GGCCACTTGCAAATGAGAGTAGCTCCTTATGATCAGCAGGTCCCAGACGA
TTGGACATGATCACGTAAGCAGTTGAAGTGTATTTCCTCACAGCATCATA
ACCTGCCTTGTAATAACTTTTCAAAGTGTCTAAAGCGACCCCAGGAGCAA
GCGGCTCATTAATCAACTCAATGGCAGCAAGGCTTGGCCTATTAGCATAT
CTCGCAGCCAGAAAGTCAATTACGGCGACAGTATCTGCTACGT
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