CN188615

Overview
NameCN188615
Unique NameCN188615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.480e-45
Identity = 90/136 (66.18%), Postives = 105/136 (77.21%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRXXXXXXXXXXXXEPAMPRVQCAQQ 725
            +LCGFQF LTHLDGRQLLIKS PGE++KP Q+KAINDEGMP +QRPFMKG+LYI F+VEFP+   L+P+QC+ LE VLPPR    LSDMELD+CEE T+HDVNI+EEMRRK+              A  RVQCAQQ
Sbjct:  281 SLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDS--LNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQAQEAYDEDEDMHGGAQ-RVQCAQQ 413          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.581e-44
Identity = 88/138 (63.77%), Postives = 103/138 (74.64%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXEPAMPRVQCAQQ 725
            ALCGFQF LTHLD RQLLIKSNPGE+IKP Q+K INDEGMP +QRPFM+G+LYI F+V+FP+   L+PDQC+ LESVLP R    L+DME+D+CEE TMHDVNI+EEMRRK  +                 RVQCAQQ
Sbjct:  283 ALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDS--LTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.581e-44
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXEPAMPRVQCAQQ 725
            ALCGFQF LTHLDGRQLLIKSNPGE++KP Q+KAINDEGMP +QRPFM+G+LYIQF V+FP+   L+PDQC+ +ESVLP      L+DME+D+CEE TMHDVNI+EEMRRK  +                 RVQCAQQ
Sbjct:  262 ALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDS--LTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.504e-42
Identity = 85/137 (62.04%), Postives = 107/137 (78.10%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRXXXXXXXXXXXXEPA-MPRVQCAQQ 725
            ALCGF+F LTHLDGRQLLIKSN GE++KP Q+KAI DEGMP +QRPFMKG++YI F VEFP+   L+PDQ ++LE++LPP+P  +L+ MELD+CEE T+H+VNI+EEM+RK+            EPA   RVQCAQQ
Sbjct:  283 ALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDS--LNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDEDDEPAGGQRVQCAQQ 417          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.377e-42
Identity = 87/140 (62.14%), Postives = 100/140 (71.43%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK----RXXXXXXXXXXXXEPAMPRVQCAQQ 725
            ALCGFQF LTHLDGR LLIKSNPGE++KP  YKAI+DEGMP +QRPFMKG+LYI F VEFP+   LSPDQ + LE+VLP      LSDME+D+CEE T+HDVNI++EMRRK    R                 RVQCAQQ
Sbjct:  283 ALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDS--LSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.402e-40
Identity = 84/138 (60.87%), Postives = 98/138 (71.01%), Query Frame = -3
Query:  318 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXEPAMPRVQCAQQ 725
            ALCGFQF LTHLD RQLLIKS PGE++KP  YKAI+DEGMP +QRPFMKG+LYI F VEFPE   LSPDQ + +E+VLP      +SDME+DDCEE T+HDVNI++EM+RK                    RVQCAQQ
Sbjct:  284 ALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPES--LSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEEDHPGGAQRVQCAQQ 419          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = -3
Query:  423 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPG-KNLSDMELDDCEEVTMHD 725
            ALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP   N+    + D EEV + +
Sbjct:  278 ALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNI----IGDTEEVELQE 375          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = -3
Query:  480 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRP 725
            ALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP
Sbjct:  278 ALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRP 359          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = -3
Query:  396 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 725
            ALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  269 ALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN188615 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = -3
Query:  396 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 725
            ALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  268 ALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
The following BLAST results are available for this feature:
BLAST of CN188615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DNJH_CUCSA2.480e-4566.18DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO3.581e-4463.77DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO3.581e-4463.77DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU1.504e-4262.04DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH4.377e-4262.14Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH2.402e-4060.87Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_BOVIN9.489e-2147.06DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_HUMAN1.239e-2052.44DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA1_RAT2.761e-2045.45DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB2.761e-2045.45DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188615 ID=CN188615; Name=CN188615; organism=Citrus sinensis; type=EST; length=727bp
CCCCCTTTTTTTTTTTTTTTTGAGATATTACAGCATATTATCAAGCAACA
AGCATCCCCATTTTATCCAATACATCAAAAAATCCAATTTAAATGACATC
CTCATCTGATCCGCTGCTGCATATACATATGCATATGTGTGTGTATATAA
ATACTATCCACCTTCTACCTGGTAAATAACTGCTACTGCTTGCTTATAAT
ATTAATTAGCACAAAAATCATGCAGCGGTAAAAAAAACATACTAGATGCC
AAATTGAAAATGCTCATTGCCTCTGATAGGCAAGGGGACCAGGAAAGGCA
AAATTGAATTTGCCTCATTGCTGAGCACACTGGACTCTTGGCATTGCTGG
TTCATCATCTTCATCATATGCCTCTTGCTGCTGTTGATACCGTTTACGCC
TCATCTCTTCATCAATGTTAACATCATGCATGGTGACCTCCTCACAATCA
TCCAGCTCCATGTCAGACAGGTTCTTGCCTGGCCTCGGAGGTAGTACACT
CTCTAAAGTCCGGCACTGATCAGGAGAAAGGATTCCACATTCCGGAAATT
CTACATTGAATTGAATGTAAAGCCTGCCTTTCATAAAGGGCCTTTGGTGA
TGCGGCATTCCCTCATCGTTGATTGCTTTGTATTGACCAGGCTTAATGAT
CTCCCCAGGATTTGATTTGATCAGTAGCTGCCTCCCATCAAGATGGGTTA
AGGCAAACTGAAACCCACACAGAGCCT
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