CN188612

Overview
NameCN188612
Unique NameCN188612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 284.648 bits (727), Expect = 3.338e-76
Identity = 131/201 (65.17%), Postives = 168/201 (83.58%), Query Frame = 2
Query:   89 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNR 691
            MV+ +Y P +AS KR ++ LVEK + FETV VDL+KGEQR PEYL +QPFG++PV+ DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+DRKHVSAWWD IS+R
Sbjct:    1 MVLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSR 201          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.773e-53
Identity = 101/204 (49.51%), Postives = 142/204 (69.61%), Query Frame = 2
Query:   89 MVVKVYGPAYAS-PKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            MVVKVYG   A+ P+RV+LC +EK+IEFE + VDL K EQ+ P++L  QPFG++P I+DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++  R++++ WW++IS RP+
Sbjct:    1 MVVKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPA 204          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.280e-43
Identity = 94/204 (46.08%), Postives = 128/204 (62.75%), Query Frame = 2
Query:   95 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            VKV+GPA ++   RV+LCL E   E+E V VD    E +SPE+LK  PFG++P  QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+ +  RPS
Sbjct:    4 VKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPS 206          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42
Identity = 86/204 (42.16%), Postives = 128/204 (62.75%), Query Frame = 2
Query:   89 MVVKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            M +K++GPA + +  RVI  L EK+++FE VPV++  G+ +   ++ L PFG++P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +   R HVSAW  DI  RP+
Sbjct:    1 MGMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPA 203          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41
Identity = 89/207 (43.00%), Postives = 130/207 (62.80%), Query Frame = 2
Query:   89 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            M +KV+G P   + +RV++ L EK +EFE VP+D+  G  + P YL L PFG++P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +R HVSAW   I  RPS
Sbjct:    1 MTIKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPS 206          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.044e-41
Identity = 86/204 (42.16%), Postives = 125/204 (61.27%), Query Frame = 2
Query:   89 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            M +KV+G P   +  RV  CL+EK+++FE VPVD++ GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPA 203          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 2
Query:   95 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            +K+YG P   +  RV   L EK ++FE VPVDL  G  + P++L L PFG++P + DGD +L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H+++P    L  QLL     G   D  +V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +  R HV AWW+ I+ RP+
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPA 204          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 86/204 (42.16%), Postives = 123/204 (60.29%), Query Frame = 2
Query:   89 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            M +KV+G P   +  RV  CL+EKE++FE VPVD+  GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++   +  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCADILARPA 203          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 2
Query:   95 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            +KV+G P   +  RV+  L EK+++FE +PVD+  G  +   +L L PFG++P ++DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +   R  VS W   IS RP+
Sbjct:   52 IKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPA 253          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 84/205 (40.98%), Postives = 127/205 (61.95%), Query Frame = 2
Query:   95 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPS 697
            +KV+G PA  + +RV++ L EK ++FE V V+L  GE +   +L   PFG++P  +DGD  L+ESRAI +Y A +Y +QGT LL    K I +  ++   ++VE H ++P   +L  + +F S +G   DE +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W  +I+ RP+
Sbjct:    4 IKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKK-LFTERPRVNEWVAEITKRPA 207          
The following BLAST results are available for this feature:
BLAST of CN188612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
GSTF3_ARATH3.338e-7665.17Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH6.773e-5349.51Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF1_ORYSJ1.280e-4346.08Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_HYOMU2.415e-4242.16Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF_SILCU1.565e-4143.00Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC2.044e-4142.16Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF3_MAIZE1.730e-4044.55Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF1_TOBAC1.730e-4042.16Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF6_ARATH2.499e-3940.89Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF4_ARATH2.499e-3940.98Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188612 ID=CN188612; Name=CN188612; organism=Citrus sinensis; type=EST; length=698bp
CGTAAAGGGGTGAGCAAACTGCCCGTAGATTACGATCACCCCCTCACTTG
CTGCTTTTTATCGACAGAAAAAGTTAACACCAGCAACGATGGTGGTCAAG
GTGTACGGTCCGGCTTATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGT
TGAGAAGGAAATCGAATTTGAAACTGTCCCCGTTGATCTCATCAAAGGAG
AGCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTTTGGAGAGCTTCCT
GTCATTCAAGATGGAGATTTTATTTTATACGAGTCGCGAGCTATCATGAG
GTACTACGCTGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGTAAAA
CAATTGAAGAAAGAGGCCTGGTGGAACAGTGGCTAGAAGTAGAGGCACAC
AACTACAACCCAGCAATTTACGAGCTGACCATCCAACTTTTATTTTCCTC
CAAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAGGAGAGTGACGAAA
AGCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCTGTCGAAGAGCAAG
TATTTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGAGTCACATTCCATT
TACCCACTACTTGGTTGGGCCGATGGGGAGACAGCATATGATTAGAGACA
GGAAGCATGTGAGTGCCTGGTGGGATGATATTAGCAACAGGCCGTCCT
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