CN181520

Overview
NameCN181520
Unique NameCN181520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3666 contig Csv1_Contig3666:127..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 6.410e-75
Identity = 122/155 (78.71%), Postives = 132/155 (85.16%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C FDGAGRG+CQTGDC GLLQCQA+G PPNTLAE+ALNQF NLDF DIS +DGFNV MEFS  SGGC R I+CTADI  QCPNELR PGGCN PC VFKT+++CCNSG CG T FS+FFK+RCPDAYSYPKDD TS FTCP GTNYKVVFCP
Sbjct:   71 RTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.806e-69
Identity = 112/155 (72.26%), Postives = 128/155 (82.58%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RT C FDG+GRG CQTGDCGG+L C+AYG+PPNTLAE+ LN F NLDF DIS +DGFNVPM+FS  S GC R I CTADI  QCP+EL+  GGCN PC VFKT+++CCNSG CGPT +SRFFK+RCPDAYSYPKDD  S FTC GGT+Y+VVFCP
Sbjct:   48 RTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.984e-64
Identity = 109/157 (69.43%), Postives = 125/157 (79.62%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSG--KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RTNC FDG+GRG C+TGDC G+L+CQ YG  PNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E+CC +G   CGPT  SRFFKERCPDAYSYP+DD TS+FTCP GTNY+VVFCP
Sbjct:   72 RTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.300e-63
Identity = 108/157 (68.79%), Postives = 123/157 (78.34%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSG--KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RTNC FDG+GRG C+TGDC G+L+CQ YG PPNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E CC +G   CGPT  SRFFK RCPDAYSYP+DD  S+FTCP GTNY+VVFCP
Sbjct:   72 RTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 7.351e-63
Identity = 107/157 (68.15%), Postives = 125/157 (79.62%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGK--CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 610
            RTNC FD +GRGRCQTGDC G LQC  +G PPNTLAE+ALNQF NLDF DIS +DGFN+PMEFS  S  C+R++ CTADI  QCPN LR PGGCN PC VF+T ++CC +G+  C  T++SRFFK+RCPDAYSYP+DD TS FTC   TNY+VVFCP
Sbjct:   69 RTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCP 223          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.351e-63
Identity = 107/158 (67.72%), Postives = 122/158 (77.22%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 610
            RTNC FDGAGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   69 RTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.648e-62
Identity = 106/158 (67.09%), Postives = 121/158 (76.58%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 610
            RTNC FDG GRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   61 RTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 3.648e-62
Identity = 105/158 (66.46%), Postives = 123/158 (77.85%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 610
            RTNC F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF  LDF DIS +DGFN+PM F+    SGG    I CTA+I  +CP ELRVPGGCN PC  F  +++CC  G CGPT FS+FFK+RCPDAYSYP+DD TS FTCPGG TNY+V+FCP
Sbjct:   69 RTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 6.880e-61
Identity = 103/158 (65.19%), Postives = 122/158 (77.22%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 610
            RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I  +CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCPGG TNY+VVFCP
Sbjct:   69 RTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CN181520 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.298e-59
Identity = 102/158 (64.56%), Postives = 121/158 (76.58%), Query Frame = -3
Query:  146 RTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRV--IRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPG-GTNYKVVFCP 610
            RTNC FDGAGRG CQTGDCGG+L+C+ +G PPNTLAE+ALNQF NLDF DIS IDGFN+PM F     G  +   I+CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT+ SR+FK+RCPDAYSYP+DD TS FTC    T+YKV+FCP
Sbjct:   70 RTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
The following BLAST results are available for this feature:
BLAST of CN181520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
TLP_ACTDE6.410e-7578.71Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN1.806e-6972.26Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC2.984e-6469.43Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC3.300e-6368.79Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH7.351e-6368.15Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OS13_SOLCO7.351e-6367.72Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TPM1_SOLLC3.648e-6267.09Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OSMO_TOBAC3.648e-6266.46Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
NP24_SOLLC6.880e-6165.19Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OLPA_TOBAC1.298e-5964.56Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181520 ID=CN181520; Name=CN181520; organism=Citrus sinensis; type=EST; length=612bp
CGCCCGAGGATTTATTAATGTGACGCGGCTTTGAAGCCACAAAGGCAAAT
TAAAGCCTTATTCCTTACACATAGATTGCAGCGACCATACAACGTATAGC
AGATAATTCCAACCAACAAATGATAGGCAGCTGACTCAGTCTTCACGGGC
AGAACACAACCTTATAATTAGTCCCACCAGGACAAGTGAAAACGCTTGTT
GCATCATCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTTGAAAAA
CCTGGAGAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGTGCTCTT
CGGTCTTGAACACGGGACATGGCCCATTACATCCTCCTGGAACCCTCAAT
TCATTCGGGCACTGCCTGACAATATCAGCCGTACATCTAATCACACGGTT
GCATCCTCCGGACACCGAACTGAATTCCATAGGAACATTAAACCCATCAA
TGTTCGAAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGTGCAAAT
TCAGCTAAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAGTAGTCC
CCCACAGTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGAATTGGC
AGTTGGTCCTAG
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