FC921829

Overview
NameFC921829
Unique NameFC921829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length270
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13538 contig Csv1_Contig13538:1..270. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC921829 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.489e-19
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = -1 
Query:    1 QQQHANVHQLVEGPWSSGLCDCFSDXXXXXXXXXXXXXTFGRIADIVDKGSSSCSVSGALFLVISLVTGCGCLYSACYRSKMRQQ 255
            + QH +     EG WS+G CDCFSD             TFG++A+IVD+GS+SC  +GAL+ +I++VTGC C+YS  YR KMR Q
Sbjct:    2 EAQHLHAKPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQ 86
The following BLAST results are available for this feature:
BLAST of FC921829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH7.489e-1948.24Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC06052H06T7 RindPdigS Citrus sinensis cDNA clone C06052H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921829 ID=FC921829; Name=FC921829; organism=Citrus sinensis; type=EST; length=270bp
CTGCTGCCTCATTTTAGATCGATAGCAGGCCGAGTATAAGCACCCGCAGC
CAGTCACCAAAGATATTACAAGAAACAGTGCGCCACTCACACTACAAGAA
GAAGATCCTTTGTCAACAATATCCGCAATTCGACCAAAAGTGATGCAGGG
GCACCAACATGTCAAGCAACAGGTTGAGCAATCGGAGAAGCAGTCACAGA
GTCCTGAGGACCAAGGTCCCTCTACGAGCTGATGCACATTCGCATGTTGC
TGCTGGAAACCAGCTACCGG
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