CK940047

Overview
NameCK940047
Unique NameCK940047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK940047 vs. ExPASy Swiss-Prot
Match: RK32_CITSI (50S ribosomal protein L32, chloroplastic OS=Citrus sinensis GN=rpl32 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15
Identity = 40/52 (76.92%), Postives = 40/52 (76.92%), Query Frame = -1 
Query:  203 MAVPKKRTSILKKRIRKNLWKKGGYWXXXXXXXXXXXLVTGNSKSFFCTTNK 358
            MAVPKKRTSILKKRIRKNLWKKGGYW           L TGNSKSFFCTTNK
Sbjct:    1 MAVPKKRTSILKKRIRKNLWKKGGYWAALKAFSLAKSLATGNSKSFFCTTNK 52
The following BLAST results are available for this feature:
BLAST of CK940047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RK32_CITSI1.727e-1576.9250S ribosomal protein L32, chloroplastic OS=Citrus... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004742_B09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940047 ID=CK940047; Name=CK940047; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTATTTATTTATTTTTATTTTCGAATTCAGTAGACAAATC
AATTGGTTCAAAACATTACAAAAGGGAATGTTTACTTACTTTTTCGATTT
TTCTAAATTCTATAGTATAAATTCAAAACACAATTAACTCATTTTTGTGT
CTGGGGGATTCAGATTATTTCAACCTTTGAAGATTATTTCNNNCTTTGAT
TATTTATTTGTTGTACAAAAAAAACTTTTTGAATTCCCAGTAACAAGGGA
TTTCGCTAACGAAAAAGCCTTCAACGCTGCCCAGTACCCCCCCTTTTTCC
AAAGATTTTTACGAATACGTTTTTTTAATATAGAAGTACGTTTTTTTGGA
ACTGCCATTCAAAAAAGAAAAGGTTAGTCATTGATCAAATTGGATGTGAA
AGACATCTATTGTTAAAATGTTAAAACAAATCATTTTTTAGTTTTACGGT
TCATTTCATTATCTGTTTATTTTTTTTATACACTAACTACCTTTAGAAAA
AAGAAATAAATCGAAATATGCAAAAATGGCATAAAATCTTACTAGAACAA
AAAATAAATAAATAAATAAATGGAATA
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