CK940039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 327.02 bits (837), Expect = 8.419e-89 Identity = 171/219 (78.08%), Postives = 184/219 (84.02%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQEPESGRRSYYCCTS 855 G KIDYVFK+VLIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQT+TL I + VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR VPTEDAKEFAE+E L FMETSALESTNVE AF+TVLTEIYRIVSKK L AN+ K T IVVPGQEP ++ CC S Sbjct: 9 GEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKA-SCCMS 226
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.904e-83 Identity = 158/220 (71.82%), Postives = 178/220 (80.91%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQEPESGRRSYYCCTSS 858 G+ N KIDYVFK+VLIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNK DL R VPTEDAKEFAEKEGL F+ETSALE+TNVE AF TVLTEIY IV+KK+L A D I++PG E + CC +S Sbjct: 8 GDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA-DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.900e-81 Identity = 149/184 (80.98%), Postives = 171/184 (92.93%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 G+ + KIDYVFK+VLIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TL I HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML+GNK+DLE RAVPTEDAKEFA+KEGL F+ETSA+E+TN+E AFLTVLTEI+ IV+KK L A+D Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADD 189
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 2.455e-80 Identity = 156/220 (70.91%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQ-EPESGRRSYYCCTS 855 G+ + KIDYVFK+VLIGDSAVGK+Q+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML GNK+DLE RAVPTEDAKEFA+KEGL F+ETSA+E+T +E AFLTVLTEI+ IV+KK L A D I+VPG + G+++ CC+S Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA-DENQSNSNPASLTGKKILVPGPGQVIPGKKA--CCSS 222
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 265.388 bits (677), Expect = 3.008e-70 Identity = 137/222 (61.71%), Postives = 163/222 (73.42%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQ------EPESGRRSYYCCTS 855 + + DY+FKIVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+T + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LR+V ED + AEKEGL F+ETSALE+TNVE AF T+L EIY I+SKKAL A + A N +PGQ + SG CC+S Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQE----------AAAANSAIPGQGTTINVDDTSGGAKRACCSS 217
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 5.132e-70 Identity = 133/216 (61.57%), Postives = 167/216 (77.31%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQEPESGRRSYYCCTS 855 +++ DY+FK+VLIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TKTL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVPTED K FAE+E L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D + N+ +E S + + CC++ Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINV----KEDSSVLKRFGCCST 218
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.753e-70 Identity = 129/181 (71.27%), Postives = 153/181 (84.53%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 +++ DY+FKIVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL+ LRAV ED + AEKEGL F+ETSALE+ N+E AF T+LTEIY I+SKKAL A + Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQE 186
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.493e-69 Identity = 134/216 (62.04%), Postives = 160/216 (74.07%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQEPESGRRSYYCCTS 855 +++ DY+FKIVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV +D +EKEGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A + N+ SG CC++ Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVA-----DTSGNTKKGCCST 216
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.547e-69 Identity = 126/181 (69.61%), Postives = 157/181 (86.74%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 741 GN +++ DY+FK+VLIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ Sbjct: 2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 1.264e-68 Identity = 125/181 (69.06%), Postives = 156/181 (86.19%), Query Frame = 1 Query: 199 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 741 G +++ DY+FK+VLIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182 The following BLAST results are available for this feature:
BLAST of CK940039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK940039 ID=CK940039; Name=CK940039; organism=Citrus sinensis; type=EST; length=867bpback to top |