CK940022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940022 vs. ExPASy Swiss-Prot
Match: PX11A_ARATH (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.300e-27 Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 105 RDFXNHLEAYLAKRDGVDKLLXLSRYATKIILASSVLPETLPLTGRLKSFESSGGLSRKAFRLGE 299 RDF NHLE YL+KRDGVDKLL +SRYATKIILASS++PET + RLKSFESS G+SRKAFRLG+ Sbjct: 15 RDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPRLKSFESSVGVSRKAFRLGK 79 HSP 2 Score: 42.3578 bits (98), Expect = 1.300e-27 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 280 KPFDSEKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 393 K F KFVQD+NALR+S D S +L+L +IAYGGE Sbjct: 73 KAFRLGKFVQDINALRSSRWD--SNHELVLLIIAYGGE 108
BLAST of CK940022 vs. ExPASy Swiss-Prot
Match: PX113_ORYSJ (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.537e-17 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 105 RDFXNHLEAYLAKRDGVDKLLXLSRYATKIILASSVLPETLPLTGRLKSFESSGGLSRKAFRLGE 299 RDF H+EAYL++RDGVDKLL +SRYA ++ LA+ LP + RLKSFESS GLSRKAFRLG+ Sbjct: 23 RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARLKSFESSVGLSRKAFRLGK 85 HSP 2 Score: 26.1794 bits (56), Expect = 5.537e-17 Identity = 16/38 (42.11%), Postives = 22/38 (57.89%), Query Frame = 1 Query: 280 KPFDSEKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 393 K F KFVQ+VNALR + ++++AYGGE Sbjct: 79 KAFRLGKFVQNVNALR-----AHPHPPPAVALLAYGGE 111
BLAST of CK940022 vs. ExPASy Swiss-Prot
Match: PX113_ORYSI (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.537e-17 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 105 RDFXNHLEAYLAKRDGVDKLLXLSRYATKIILASSVLPETLPLTGRLKSFESSGGLSRKAFRLGE 299 RDF H+EAYL++RDGVDKLL +SRYA ++ LA+ LP + RLKSFESS GLSRKAFRLG+ Sbjct: 23 RDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPA--ASARLKSFESSVGLSRKAFRLGK 85 HSP 2 Score: 26.1794 bits (56), Expect = 5.537e-17 Identity = 16/38 (42.11%), Postives = 22/38 (57.89%), Query Frame = 1 Query: 280 KPFDSEKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 393 K F KFVQ+VNALR + ++++AYGGE Sbjct: 79 KAFRLGKFVQNVNALR-----AHPHPPPAVALLAYGGE 111
BLAST of CK940022 vs. ExPASy Swiss-Prot
Match: PX112_ORYSJ (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica GN=PEX11-2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.771e-15 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 105 RDFXNHLEAYLAKRDGVDKLLXLSRYATKIILASSVLPETLP--LTGRLKSFESSGGLSRKAFRLGE 299 RD H+EAYL++RDGVD LL +S YA ++ LA + LP T RL+SFESS GLSRKAFRLG+ Sbjct: 25 RDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPPLPHAATARLRSFESSVGLSRKAFRLGK 91 HSP 2 Score: 28.4906 bits (62), Expect = 4.771e-15 Identity = 15/38 (39.47%), Postives = 21/38 (55.26%), Query Frame = 1 Query: 280 KPFDSEKFVQDVNALRNSHLDSLSREDLILSVIAYGGE 393 K F KFVQ +NALR + +L ++AYGG+ Sbjct: 85 KAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQ 122 The following BLAST results are available for this feature:
BLAST of CK940022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK940022 ID=CK940022; Name=CK940022; organism=Citrus sinensis; type=EST; length=394bpback to top |