EY649739

Overview
NameEY649739
Unique NameEY649739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649739 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 1 
Query:   79 FRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSTSWRTDDEVMGMFDAWLVKHGMA--YNAMGEKEMTLDISNDTPKVIREH 324
            F  PTMA+  L +  VSSA+DMSI+SYD+ H   +T  R++ EVM +++AWLVKHG A   N++ EK+   +I  D  + + EH
Sbjct:    3 FLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEH 86
The following BLAST results are available for this feature:
BLAST of EY649739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RD21A_ARATH1.230e-1345.24Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-A01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649739 ID=EY649739; Name=EY649739; organism=Citrus sinensis; type=EST; length=761bp
TTAACACGNCGACCCACGCGTGCGGCATCGCTGCCTCCCAAAAATTAAAA
AAAAGCCCGGTTCTCAAAAGAGGGTTTGTTTAGATCACCAACCATGGCCA
TGTTTCTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATT
GTCTCTTATGATAAAACCCATGAGTCAAAATCTACCAGCTGGAGGACCGA
CGATGAGGTTATGGGTATGTTCGATGCCTGGCTCGTGAAGCATGGCATGG
CTTATAACGCTATGGGTGAAAAAGAGATGACGCTTGATATCTCCAACGAC
ACTCCTAAGGTCATTCGTGAACACTACCAACCATAACCGGACCCACATAG
TAGCGGTTCATACCGTTCGCTTATTTTTACCACCGAGGAGTTCCCGTCCC
TTGCATCAGGGTGTACTCCTCGGTGCTTAAAGGACTCCCCTGAAATGATA
GGGAGCAAGCGTTATTTGCCCCTGTCCCCGAGCCGTTTACAGACTCTGCC
TCTCGCAGAAAAAGGACCTTACCTCCCCCACAATCATGCAACATACAACT
TCTCGTGCTTTTCAGCTCCCAGTTTTCAACGTTCAAGAAGAGGATCTGGG
GGCTCAATCTAACTCCATAAGGAGACGGTTAGTATATAATAATTACTAAC
CGATTTATGCTGGCAATGCCCGCACGCGTCCCTTTTCCTTTTCTTTTTCT
CTCCTTTCATCCCATTATTACACATTCCCACCCAGCGTTCCTCTCTCCCT
TTAACAATGGC
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