CK939887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ARP4_ARATH (Actin-related protein 4 OS=Arabidopsis thaliana GN=ARP4 PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.017e-85 Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMD-IDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKKLESKGI 805 MYGGDEVSAIV+DLGSHTCKAGYAGEDAPKAVFPSV+GA+D ++ +D ++ + + ++ DSK +S K K KRKLYVG+Q++ +RRDHMEVLSP+KDG HAF+ CL+IDP EHPMLLAEP NTQQQRE+ AEL+FEKY VPALF+AKN VLTSFA GRATSLVVDCGGGSTT++PVHDGYVLQK V +SP+GGEFLT+CL+K LESKGI Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT--ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGI 222
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSJ (Actin-related protein 4 OS=Oryza sativa subsp. japonica GN=ARP4 PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.060e-83 Identity = 158/226 (69.91%), Postives = 182/226 (80.53%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNN---VDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKKLESKGI 805 MYGGDEVSAIVID+GS++CKAGYAG+D PKAVFPSVVG+I+Q D A A++ + +A DSKN +D +K K KRKLYVG Q L FRRDHMEV+SP+KDG HAFR+ LLI+P+EHPML+AEPS+NT QQRE+ AEL+FEKY VPALFLAKNAVLTSFA GRATSLVVD GGGST VA VHDGYVLQK V TSPIGGEFLT+C+MK LESKG+ Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVG-QELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGV 225
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSI (Actin-related protein 4 OS=Oryza sativa subsp. indica GN=ARP4 PE=2 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 8.060e-83 Identity = 158/226 (69.91%), Postives = 182/226 (80.53%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNN---VDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKKLESKGI 805 MYGGDEVSAIVID+GS++CKAGYAG+D PKAVFPSVVG+I+Q D A A++ + +A DSKN +D +K K KRKLYVG Q L FRRDHMEV+SP+KDG HAFR+ LLI+P+EHPML+AEPS+NT QQRE+ AEL+FEKY VPALFLAKNAVLTSFA GRATSLVVD GGGST VA VHDGYVLQK V TSPIGGEFLT+C+MK LESKG+ Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVG-QELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGV 225
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.033e-46 Identity = 97/146 (66.44%), Postives = 109/146 (74.66%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQ--MDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERT 568 MYGGDEVSAIV+DLGSHTCKAGYAGEDAPKAVFPSVVGAID MDIDD+AN D+K +S+K KGKRKLY G+Q+L FRRD ME+LSP KDG HAFR CL+IDP EHPMLLAEP N+QQQRE++ Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTE------DAK---ESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREKS 137
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.344e-45 Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGK-GKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS+T +AGYAGED PK FP+ +G + ER+ GS + +D +KGK G Y+ T +L R++ME +SPLK+G H ++ + + HP+L++E NT+ +RE+ EL+FE YN+PA FL K AVLT+FA GR+T L++D G TT PVHDGYVLQ+G+ SP+ G+F+T Sbjct: 5 VYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMV----------VERDDGSTL---MEIDGDKGKQGGPTYYIATNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6A_HUMAN (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.755e-45 Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGK-GKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS+T +AGYAGED PK FP+ +G + ER+ GS + +D +KGK G Y+ T +L R++ME +SPLK+G H ++ + + HP+L++E NT+ +RE+ EL+FE YN+PA FL K AVLT+FA GR+T L++D G TT PVHDGYVLQ+G+ SP+ G+F+T Sbjct: 5 VYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMV----------VERDDGSTL---MEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45 Identity = 92/212 (43.40%), Postives = 132/212 (62.26%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGK-GKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS+T +AGYAGED PK FP+ +G + ER+ GS + +D +KGK G Y+ T +L R++ME +SPLK+G H ++ + + HP+L++E NT+ +RE+ EL+FE Y++PA FL K AVLT+FA GR+T L++D G TT PVHDGYVLQ+G+ SP+ G+F+T Sbjct: 5 VYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVV----------LERDDGSTM---MEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43 Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS + +AGYAGED PKA FP+ VG + AE G ++ + K K + ++ T +L RD EV+SPLK+G H + + + +P HP+L++E NT+ +RE+ EL+FE+YN+PA FL K AVLT+FA GR+T LV+D G TT PVHDGYVLQ+G+ SP+ G+F++ Sbjct: 5 VYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLA---------AEEGGGLELEGE------KEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIS 200
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43 Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS + +AGYAGED PKA FP+ VG + AE G ++ + K K + ++ T +L RD EV+SPLK+G H + + + +P HP+L++E NT+ +RE+ EL+FE+YN+PA FL K AVLT+FA GR+T LV+D G TT PVHDGYVLQ+G+ SP+ G+F++ Sbjct: 5 VYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLA---------AEEGGGLELEGE------KEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIS 200
BLAST of CK939887 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43 Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 137 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRDHMEVLSPLKDGXXXXXXXXXXXXXHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELIFEKYNVPALFLAKNAVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLT 769 +YGGDEV A+V D+GS + +AGYAGED PKA FP+ VG + AE G ++ +K K + ++ T +L RD EV+SPLK+G H + + + +P HP+L++E NT+ +RE+ EL+FE+YN+PA FL K AVLT+FA GR+T LV+D G TT PVHDGYVLQ+G+ SP+ G+F++ Sbjct: 5 VYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLA---------AEEGGGLELEG------DKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIS 200 The following BLAST results are available for this feature:
BLAST of CK939887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 447
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939887 ID=CK939887; Name=CK939887; organism=Citrus sinensis; type=EST; length=809bpback to top |