CK939885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 4.380e-87 Identity = 167/234 (71.37%), Postives = 187/234 (79.91%), Query Frame = 3 Query: 141 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXKG 839 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIG VIAVGPG LDEEG PL ++ G+TV+YSKYAGN KG Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKG 234 HSP 2 Score: 78.5666 bits (192), Expect = 4.944e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGIL 593 +KPL DRV +K+ EEKT GG+ L T + KP G V+AVG G + K+ + V G+ V+YSKYAG + + +G+N++ LR DV+ IL Sbjct: 160 LKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.368e-72 Identity = 139/237 (58.65%), Postives = 174/237 (73.42%), Query Frame = 3 Query: 141 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXKG 839 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS G V+A GPG LDEEGNR PL + GNTV+YSKYAGN KG Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKG 236
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.462e-23 Identity = 48/95 (50.53%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDE 605 IKPL DRV++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ TK+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 68.5514 bits (166), Expect = 5.117e-11 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAG 824 +KPL+DRV IK EE T GL + + +KEKP G VIAVGPG + E G + +S+ G+ V+Y KYAG Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAG 74
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG K Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG K Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 3 Query: 321 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 615 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG K Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK 75
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 74.3294 bits (181), Expect = 9.325e-13 Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGN 827 +LKPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AGN Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGN 73
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 78.5666 bits (192), Expect = 4.944e-14 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 596 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 78.5666 bits (192), Expect = 4.944e-14 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK 76
BLAST of CK939885 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.414e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 318 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 593 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 72.0182 bits (175), Expect = 4.628e-12 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 612 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNXXK 836 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG K Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK 75 The following BLAST results are available for this feature:
BLAST of CK939885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939885 ID=CK939885; Name=CK939885; organism=Citrus sinensis; type=EST; length=843bpback to top |