CK939878

Overview
NameCK939878
Unique NameCK939878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939878 vs. ExPASy Swiss-Prot
Match: ZDHC7_ARATH (Probable S-acyltransferase At3g18620 OS=Arabidopsis thaliana GN=At3g18620 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.780e-68
Identity = 116/181 (64.09%), Postives = 136/181 (75.14%), Query Frame = 1 
Query:  175 MAVSPNEHYVTTIDKDNEPTCWGCGLHLVLPSYTPTFKCGWCGAITSLNLQKHESKWFKWRRLRDRCFVCVLFGFMGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFYLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFI 717
            M  S    +V TI++D E  CWGCGL+LVLPSY P FKCGWCGAIT+ N  + E+K F  RR RDRCFV +L  FM FVICGG+WA +PV+FS+S  CGIFH V    L++STLS F L AF C G    +L+G++P VG G L NYTFC+YCSKPKSPRTHHCR+CGMCVLDMDHHCPFI
Sbjct:    1 MEDSSQGSFVATINEDYEAICWGCGLNLVLPSYAPVFKCGWCGAITNQNPVRPETKSFGLRRFRDRCFVVILAVFMLFVICGGIWAAYPVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNILYGTHPGVGNGALNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFI 181
The following BLAST results are available for this feature:
BLAST of CK939878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZDHC7_ARATH3.780e-6864.09Probable S-acyltransferase At3g18620 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004744_D11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IVF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939878 ID=CK939878; Name=CK939878; organism=Citrus sinensis; type=EST; length=749bp
GGGGGAATTGTTCAAAAAAATATATTTTGGCATAACAGAGCTTTGGCCAC
TGCTCGTATCGTAATTGGCTTGGCCCCTTTGAGAACGAAAGCAAGAGGGA
GAACGAATTGTGTTTCGCTCTCCGTTGACTTGTCTCATCTGGTTCAGTCT
TCAATCCGTTCGCCATAGCTCCTCATGGCTGTCTCTCCCAATGAACACTA
TGTGACAACGATCGATAAGGATAATGAGCCAACATGTTGGGGTTGTGGAC
TGCATCTTGTTCTTCCATCTTACACGCCTACTTTCAAGTGCGGTTGGTGT
GGAGCCATCACAAGTCTAAATTTACAGAAACACGAAAGCAAGTGGTTTAA
GTGGAGACGCTTGCGTGACCGATGCTTTGTTTGTGTCCTCTTTGGATTTA
TGGGCTTTGTGATATGTGGTGGAGTGTGGGCAGTGCATCCTGTTGTTTTC
TCTGTCAGCTACTTTTGTGGGATTTTTCACTTGGTCATAGCAATATGCCT
GTCTGTATCTACTCTTTCTATGTTCTACCTTGCAGCATTCCACTGTCCTG
GTGCATCGCCCCTTGTTCTGTGGGGTAGCTATCCACTTGTGGGGAAAGGT
GACCTTGAAAACTATACTTTTTGTCACTATTGTTCAAAGCCGAAATCTCC
AAGAACTCATCACTGCCGCTCATGTGGGATGTGTGTGCTGGACATGGACC
ATCACTGCCCTTTTATCAGTTTGAACAATCAAAAGCCATTGGTGTGTAA
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