CK939871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthetase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 2.728e-110 Identity = 189/220 (85.91%), Postives = 202/220 (91.82%), Query Frame = 3 Query: 42 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 M+DL+S F+ VY VLK ELL+DPAFEF DSRQW+DRMLDYNVPGGKLNRGLSV+DSYRLLK+G EL DDE FL+SALGWC EWLQAYFLVLDDIMD SHTRRGQPCWFRVPKVGMIAANDGVLLRNHI RILK HFR KPYY DLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L LHRRIVQYKTAYYSFYLPVACALLM GENLD H++VK+I Sbjct: 1 MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNI 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS_HELAN (Farnesyl pyrophosphate synthetase OS=Helianthus annuus GN=FPS1 PE=2 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 8.777e-109 Identity = 187/219 (85.39%), Postives = 203/219 (92.69%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 SDLKS+F+ VY LK ELLNDPAFEF HDSRQW+D+MLDYNVPGGKLNRGLSVVDSY+LLK G ELTDDE FL+SALGWC EWLQAYFLVLDDIMDGSHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+LD HVEVK++ Sbjct: 3 SDLKSKFLHVYQTLKSELLNDPAFEFHHDSRQWIDKMLDYNVPGGKLNRGLSVVDSYQLLK-GAELTDDEIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGMIAANDGLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNV 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS_ARTAN (Farnesyl pyrophosphate synthetase OS=Artemisia annua GN=FPS1 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 1.267e-107 Identity = 185/219 (84.47%), Postives = 204/219 (93.15%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 +DLKS+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSVVDSY+LLK G EL+DDE FLSSALGWC EWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG+LLRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+LDKHVEVK++ Sbjct: 4 TDLKSKFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGG-ELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNV 221
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthetase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.655e-107 Identity = 184/220 (83.64%), Postives = 199/220 (90.45%), Query Frame = 3 Query: 42 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 M+D KS F+ VY +LK ELL DPAFEF DSRQWV+RMLDYNVPGGKLNRGLSV+DSY+LLK+G+EL D+E FL+SALGWC EWLQAYFLVLDDIMD SHTRRG PCWFRVPKVGMIA NDGV+LRNHI RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L LHRRIVQYKTAYYSFYLPVACALLM GENLD H +VK+I Sbjct: 1 MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNI 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthetase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 9.082e-106 Identity = 179/219 (81.74%), Postives = 203/219 (92.69%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 +D++S+F++VY LK EL+NDPAFEFD DSRQW+++MLDYNVPGGKLNRGLSV+DSY+LLK GK LTDDE F +SALGWC EWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+L+KHVEVK++ Sbjct: 3 TDIRSKFLQVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVIDSYQLLKGGK-LTDDEIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNV 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS1_PARAR (Farnesyl pyrophosphate synthetase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 9.082e-106 Identity = 182/219 (83.11%), Postives = 203/219 (92.69%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 SDLKSRF++VY LK EL+NDPAFEFD DSRQWV++MLDYNVPGGKLNRGLSV+DSY+LLK G ELTD+E FL++ALGWC EWLQAYFLVLDDIMD SHTRRGQPCWFR+PKVGMIAANDG++LRN++ RILK HFR KPYYVDLLDLFNEVEFQTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+L+KH EVK++ Sbjct: 3 SDLKSRFLQVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYQLLKGG-ELTDNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNV 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 1.228e-102 Identity = 175/220 (79.55%), Postives = 197/220 (89.55%), Query Frame = 3 Query: 42 MSDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 M+DLKS F++VY VLK +LL DP+FEF H+SRQW++RMLDYNV GGKLNRGLSVVDSY+LLK+G++LT+ E FLS ALGWC EWLQAYFLVLDDIMD S TRRGQPCWFR PKVGMIA NDG+LLRNHI RILK HFR+ PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLSKYSL +HRRIV+YKTAYYSFYLPVACALLMAGENL+ H +VK + Sbjct: 1 MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTV 220
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthetase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2) HSP 1 Score: 371.318 bits (952), Expect = 2.735e-102 Identity = 174/219 (79.45%), Postives = 197/219 (89.95%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 +DLKS F+ VY VLK +LL+DP+FEF ++SR WVDRMLDYNV GGKLNRGLSVVDS++LLK+G +LT+ E FLS ALGWC EWLQAYFLVLDDIMD S TRRGQPCWFRVP+VGM+A NDG+LLRNHI RILK HFRDKPYYVDL+DLFNEVE QTA GQMIDLITT EGEKDL+KYSL +HRRIVQYKTAYYSFYLPVACALLMAGENL+ H++VK++ Sbjct: 44 TDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNV 262
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: FPPS_MAIZE (Farnesyl pyrophosphate synthetase OS=Zea mays GN=FPS PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.360e-93 Identity = 158/218 (72.48%), Postives = 189/218 (86.70%), Query Frame = 3 Query: 48 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 D ++ F +Y LK+ELL DPAFEF +SRQW+DRM+DYNV GGK NRGLSVVDSY+LLK L ++E FL+ LGWC EWLQA+FLVLDDIMD SHTRRGQPCWFRVP+VG+IAANDG++LRNHISRIL+ HF+ KPYY DLLDLFNEVEF+TASGQ++DLITT EGEKDL+KY++ +H RIVQYKTAYYSFYLPVACALL++GENLD + +V++I Sbjct: 11 DTRAAFARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGADALGEEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSFYLPVACALLLSGENLDNYGDVENI 228
BLAST of CK939871 vs. ExPASy Swiss-Prot
Match: CPPAS_TANCI (Chrysanthemyl diphosphate synthase, chloroplastic OS=Tanacetum cinerariifolium PE=1 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.360e-93 Identity = 161/219 (73.52%), Postives = 192/219 (87.67%), Query Frame = 3 Query: 45 SDLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCTEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDI 701 S+L S+F++VY LK EL++DP+FEFD DSRQWV+RM+DYNVPGGK+ RG SVVDSY+LLK G+ELT+DE FL+ ALGWCTEWLQA+ LVLDDIMDGSHTRRGQPCWFR+P+VG++A NDGVLLRNH+ RILK +F+ KPYYV LLDLFNE EFQT SGQMID I + G+KDLSKY++ L+RRIVQYK +YYS YLP+ACALLM GENL+ HV+VKDI Sbjct: 56 SNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNVPGGKMVRGYSVVDSYQLLK-GEELTEDEAFLACALGWCTEWLQAFILVLDDIMDGSHTRRGQPCWFRLPEVGVVAINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEFQTISGQMIDTICRLAGQKDLSKYTMTLNRRIVQYKGSYYSCYLPIACALLMFGENLEDHVQVKDI 273 The following BLAST results are available for this feature:
BLAST of CK939871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939871 ID=CK939871; Name=CK939871; organism=Citrus sinensis; type=EST; length=702bpback to top |