CK939868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939868 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 357.451 bits (916), Expect = 5.548e-98 Identity = 176/258 (68.22%), Postives = 207/258 (80.23%), Query Frame = 3 Query: 75 PLNKR-FSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENNLVGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKACYEANFPCRTPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRDHSAGNGTKSSDAQSTNSQVRYQQRELLES 845 P+N SS+ RTGQWVFSQ+IPTD+VV VGEANF LHKFMLVAKSNYIRKLI+ESK++D+TRINLS+IPGGPE+FEKAAKFCYGVNFEITV NVAAL CAAEFLQMTDKYC+NNL GRT+DF KSCE LLP++ DL IV+RC+DV AKAC EA FPCRTPPNWWTEEL I+D++FFS ++++MK+RG K ++ASA+ITYTE+SLRDLVRDHS G G K SD S R QQR+L++S Sbjct: 8 PINMNSMSSSLARTGQWVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAMFPCRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLVRDHS-GRGVKYSDPGDNESDERSQQRDLVQS 264
BLAST of CK939868 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.172e-45 Identity = 90/236 (38.14%), Postives = 144/236 (61.02%), Query Frame = 3 Query: 96 SAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENNLVGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKACYE---ANF------------------PCRTPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSL 740 S+++ +W+F +++P+DI + V NF LHKF LV++S IR+++ E +++D++++ L N+PGG E FE AAKFCYG+NFEIT NVA L C +++L+MT++Y ++NL RTE++ K E LLPLA++L I+ RCID +KAC E ++F +WW E+LS++ I+ + R++ AMK RG + +I ++L++Y ER L Sbjct: 28 SSRQSCSEWIF-RDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLNLPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAEREL 262
BLAST of CK939868 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.217e-38 Identity = 87/258 (33.72%), Postives = 138/258 (53.49%), Query Frame = 3 Query: 108 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENNLVGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKAC--------------------------------YEANFPCR---------TPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRD 758 R W + +IP+D++V +G+ NF LHK+ L+++S + +LI ES++ D T + L ++PGGPE FE A+KFCYGV ++T N++ LRCAAE+L+MT+ E NL+ +TE F KSCE L P AE+L IV+RC + KAC +++F C PP+WW E++SI+ I+ F R+I A+K +G + + + ++ Y + L L+++ Sbjct: 41 RGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYTGKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKE 298
BLAST of CK939868 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36 Identity = 98/284 (34.51%), Postives = 141/284 (49.65%), Query Frame = 3 Query: 93 SSAKERTGQ-WVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIE-SKEAD-LTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENNLVGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKACYEANF-----------------------------PCRTPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRDHSA--GNGTKSSDAQSTNSQVRYQQRELLE 842 S A +R GQ W + +P+DIVV VGE +F LHKF L+++S + + I E SKE D I +S++PGG + FE AKFCYGV E+T NV LRCAAE L+MT+++ E NL+ +TE F SC+ +L A++L I ++CI+ +A + N P T +WW E+ S++ F R+I M+ RG + IA +L YT + L L R +G S+ S N +Q+ LLE Sbjct: 10 SDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRRRGGPESSGRFSTPLGSGNVLSEEEQKNLLE 293
BLAST of CK939868 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.923e-27 Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 108 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEAD---------LTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENNLVGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKAC 575 R W + +IP+D++V VG+ NF LHK+ ++++S + + + ES AD + + + ++PGG FE AA+F YG+ ++T N++ LRCAAE+L+MT++ E NL+ +TE F KSCEAL P AE+L IV+RC + KAC Sbjct: 39 RDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKAC 203 The following BLAST results are available for this feature:
BLAST of CK939868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939868 ID=CK939868; Name=CK939868; organism=Citrus sinensis; type=EST; length=845bpback to top |