CK939854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.565e-63 Identity = 125/184 (67.93%), Postives = 147/184 (79.89%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQEAQ 701 MGRGRVQLKRI+NKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMER+LERYERY +AERQL + G+WTLE+++LKAR+EVLQRNQKH++GEDL L++KELQ++E Q+DS LK IRSRKNQLM +SIS + KVK EK ++Q+ Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQ 184
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.317e-62 Identity = 120/184 (65.22%), Postives = 147/184 (79.89%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQEAQ 701 MGRGRVQLKRI+NKINRQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY+ LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IRSRKNQLM SI+ + ++K EK+L + + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQE 184
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 6.317e-62 Identity = 119/184 (64.67%), Postives = 148/184 (80.43%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQEAQ 701 MGRGRVQLKRI+NKINRQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY+ LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IR+RKNQLM +SI+ + ++K EK+L + + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQE 184
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.838e-61 Identity = 124/181 (68.51%), Postives = 141/181 (77.90%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQ 692 MGRGRVQLKRI+NKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMERILERYERY +AE+QL + +WTLE+ +LKAR+EVLQRNQKH++GEDL LS+KELQ++E Q+DS LK IRSRKNQLM +SIS + KVK EK Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQQ 181
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.838e-61 Identity = 119/182 (65.38%), Postives = 144/182 (79.12%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQE 695 MGRGRVQLKRI+NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFS+KGKLFEYSTDSCMERILERY+RY Y+++QL ++ + NW LE+++LKAR+EVL++N+++FMGEDL LSLKELQS+E Q+D+ +K IRSRKNQ M +SIS K+K EK Q+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQ 182
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.032e-60 Identity = 122/184 (66.30%), Postives = 144/184 (78.26%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLLSQEAQ 701 MGRGRVQLKRI+NKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+TDSCMER+LERYERY +AE+QL + G+WTLE ++LKAR+EVLQRN+K ++GEDL L++KELQ++E Q+ S LK IRSRKNQLM +SIS + KVK EK + Q+ Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQ 184
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.913e-60 Identity = 118/185 (63.78%), Postives = 145/185 (78.38%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEK-LLSQEAQ 701 MGRGRVQLKRI+NKINRQVTFSKRRSGLLKKAHEISVLCDAEVAL++FS+KGKLFEYSTDSCME+ILERY+RY Y+++QL +I + NW LE+++LKAR+EVL++N+++FMGEDL LSLKELQS+E Q+ + +K IRSRKNQ M +SIS K+K EK + QE Q Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQ 185
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 7.228e-58 Identity = 110/152 (72.37%), Postives = 134/152 (88.16%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 605 MGRG+VQLKRI+NKINRQVTFSKRRSGLLKKA+EISVLCDAEVALI+FSTKGKL+EY+TDSCM++ILERYERY YAE+ L + E + GNW EY +LKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57 Identity = 113/190 (59.47%), Postives = 149/190 (78.42%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG--NWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXA*KVKXXEKLL-SQEAQCRE 710 MGRGRV+LKRI+NKINRQVTFSKRR+GLLKKA EISVLCDAEV+LIVFS KGKLFEYS++SCME++LERYERY YAERQL A + N NW++EYS LKA++E+L+RNQ+H++GE+L +SLK+LQ++EQQ+++ LK IRSRKNQLM +S++ ++K E +L +++ QC + Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQ 190
BLAST of CK939854 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.044e-56 Identity = 108/152 (71.05%), Postives = 133/152 (87.50%), Query Frame = 3 Query: 150 MGRGRVQLKRIDNKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSELKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 605 MGRG+VQLKRI+N INRQVTFSKRRSGLLKKA+EISVLCDAEVALI+FSTKGKL++Y+TDSCM++ILERYERY YAE+ L + E + GNW EY +LKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152 The following BLAST results are available for this feature:
BLAST of CK939854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939854 ID=CK939854; Name=CK939854; organism=Citrus sinensis; type=EST; length=710bpback to top |