CK939827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.914e-47 Identity = 104/166 (62.65%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 161 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSNGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALA 634 RS NQ +++ Y+P+LRRNV+L VR A PT P A PQP + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ + QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS M+SDAE WNGR AMLGLVALA Sbjct: 20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALA 185
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.494e-33 Identity = 84/187 (44.92%), Postives = 116/187 (62.03%), Query Frame = 2 Query: 92 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSNGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALA 634 MA+S ++ A + T I R G N L K LP +RRN +VR T P + ++T + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ NGGV WFL TS +L +A+L+P+++G+S E+K++GF SDAE+WNGRFAM+GLVALA Sbjct: 1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALA 186
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 83/178 (46.63%), Postives = 107/178 (60.11%), Query Frame = 2 Query: 104 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSNG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALA 634 +AT ++S A V + RS A+ + + LP+L R L VR P+ P PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL +G G AWF T +L++ASLVPL +G S E ++ M ++AELWNGRFAMLGLVALA Sbjct: 1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALA 159
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 308 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSNG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALA 634 PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL +G G AWF T +L++ASLVPL +G S E ++ M ++AELWNGRFAM+GLVALA Sbjct: 45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALA 154
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.946e-30 Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 281 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--NGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALA 634 PT A P+P K + + + AFSGPAPERINGRLAM+GFVAAL VE ++G + Q+ + G+AWFL T+ + +VASL+PL +G SVESKS G ++DAELWNGRFAMLGLVALA Sbjct: 100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALA 218
BLAST of CK939827 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 58/120 (48.33%), Postives = 69/120 (57.50%), Query Frame = 2 Query: 284 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSNGGVAWFLGTSVLLTVASLVPLFKGVSVESKSD--GFMTSDAELWNGRFAMLGLVAL 631 T P + P PP P +EV FSG APE INGRLAM+GFVAALG E+S G+ V QL + L T VL + ASL+P F K D G T DAE+ NGRFAM+G A+ Sbjct: 47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAM 160 The following BLAST results are available for this feature:
BLAST of CK939827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939827 ID=CK939827; Name=CK939827; organism=Citrus sinensis; type=EST; length=635bpback to top |