CK939729

Overview
NameCK939729
Unique NameCK939729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.944e-31
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 1
Query:  100 TADLRRIFKQLDKNGDDQVSLEELNWLLERIG-VRLSLEELESFVGKSSLDLNEFL-FFWKSI-----SKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMML 570
            T DLRR+FK LDKN D  V+L+EL W+L+++G    + +ELE  VGK SLDL+EFL F++ ++     SK+N + V D++                    +  AFNVFD+NGDG+IS EEL++VL RLG  +E    DC RMI ++D NLDG +DFEEFKNM+L
Sbjct:    8 TNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRFYYDAVLDSKGSKKNIDVVADND------------------EAIARAFNVFDVNGDGYISAEELRDVLERLGFEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMIL 153          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.006e-20
Identity = 60/168 (35.71%), Postives = 91/168 (54.17%), Query Frame = 1
Query:   94 LHTADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSD----LLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            + + +LR++FK  DKNGD +++ +EL    +  G+ +  +EL++ +      G   +D+ EF   ++SI        DD   +                 D    + EAFNVFD NGDGFI+ +EL++VLS LGL   ++  DC RMI M D + DG +DF+EFK MM
Sbjct:    1 MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRSILG------DDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20
Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  103 ADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSL------DLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            A+L RIF+  D+NGD +++ +ELN  LE +G+ +  ++L   + K  L      D+ EF   +++I ++ + +                        D+ EAFNVFD N DGFI+ EEL++VL+ LGL   ++ +DC RMI   D + DG+++F+EFK MM
Sbjct:    4 AELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGGLYQTIMEERDEE-----------------------EDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19
Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  103 ADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            ++L+R+F+  DKNGD +++ EELN  LE +G+ +  ++L   +      G   +D++EF   + SI  +++N  +  E                   D+ +AFNVFD +GDGFI+ EEL++V++ LGL   K+   C +MI   D + DG ++++EF  MM
Sbjct:   64 SELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEE------------------EDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.545e-19
Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   94 LHTADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            + + +L R+F+  DK+GD +++ +ELN   + +G+ +  +EL   +      G   +D+ EF   +K+I  ++ ++V + ++K                    EAFNVFD NGDGFI+ +EL+ VLS LGL   K+ ++C +MI   D + DG +++ EF+ MM
Sbjct:    1 MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIMVEDEDEVGEEDMK--------------------EAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMM 144          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.669e-19
Identity = 64/172 (37.21%), Postives = 86/172 (50.00%), Query Frame = 1
Query:   94 LHTADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQ--------NNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            L+   L+RIF   DKNGD  +++EEL+  L R+G+   L +L+S V      G + L+ ++F    K++             N+ D                     SDL EAF VFD NGDGFIS  ELQ VL +LGL +    +   +MI   D N DG +DF EFKNMM
Sbjct:   25 LNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENE-------------SDLAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1
Query:  103 ADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            A+LRR+F+  D++GD +++ EEL   LER+G+ +  EEL + +      G   +D++EF   ++++ + +                          + + EAF+VFD NGDGFI+ +EL  VL+ LG+   ++ +DC RMI   D + DG +DF EFK MM
Sbjct:    7 AELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYETVMRVDGG------------GGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMM 155          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.814e-18
Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  106 DLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            +L+R+F+  DKNGD  ++ +EL+  L  +G+ +  +EL   +      G   +D++EF   +K+I  + + + +D                      + EAFNVFD NGDGFI+ +EL+ VLS LGL   K+  DC +MI   D + DG ++++EF+ MM
Sbjct:    5 ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIMDEEDEEEED----------------------MKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.799e-18
Identity = 57/167 (34.13%), Postives = 88/167 (52.69%), Query Frame = 1
Query:  103 ADLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSI------SKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            A+L R+F+  D+NGD +++ EEL   L ++G+ +  +EL + +      G   +D+ EF   ++SI      SK    K ++ E                   D+ EAF VFD NGDG+I+ +EL  VL+ LGL   ++ ++C RMI   D + DG +DF EF  MM
Sbjct:   91 AELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEE----------------EDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241          
BLAST of CK939729 vs. ExPASy Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  106 DLRRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFV------GKSSLDLNEFLFFWKSISKQNNNKVDDHEVKXXXXXXXXXXXXXXXXSDLLEAFNVFDLNGDGFISCEELQNVLSRLGLWDEKSGKDCTRMICMYDTNLDGVLDFEEFKNMM 567
            DL+R+F+  DKNGD +++ EELN  LE +G+ +  ++L   +      G   +D+NEF   + SI ++                            D+ +AFNVFD +GDGFI+ EEL +V++ LGL   K+ + C  MI   D + DG ++++EF  MM
Sbjct:   51 DLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFESLYGSIVEEKEE------------------------GDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNYKEFLQMM 186          
The following BLAST results are available for this feature:
BLAST of CK939729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CML44_ARATH4.944e-3147.56Probable calcium-binding protein CML44 OS=Arabidop... [more]
CML28_ORYSJ3.006e-2035.71Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML3_ARATH6.697e-2035.40Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML5_ARATH1.492e-1933.54Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML6_ARATH2.545e-1932.32Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]
CML42_ARATH5.669e-1937.21Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CML17_ORYSJ9.670e-1934.16Probable calcium-binding protein CML17 OS=Oryza sa... [more]
CML7_ARATH2.814e-1833.75Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CML22_ORYSJ4.799e-1834.13Probable calcium-binding protein CML22 OS=Oryza sa... [more]
CML4_ARATH8.186e-1833.75Calmodulin-like protein 4 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_E03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939729 ID=CK939729; Name=CK939729; organism=Citrus sinensis; type=EST; length=652bp
GCGGGGAGCNNNCGCACCACCAAATTGAACAAAGCTTCAGTTTCTTATTT
CTATTTATGTTCTTTGGTGATCGCCTTCGCCAAGATGTGTCCTCTTCACA
CGGCTGACTTGCGAAGAATTTTCAAGCAGCTTGACAAAAATGGGGATGAC
CAAGTGAGCCTAGAGGAGCTTAATTGGCTTCTTGAGAGAATTGGAGTTCG
TTTAAGCCTTGAAGAGCTTGAATCATTTGTGGGAAAATCAAGCCTGGATT
TGAATGAATTCCTGTTCTTTTGGAAGTCCATATCAAAGCAAAACAATAAT
AAAGTCGATGATCATGAGGTTAAGGGTGAGATCAACGGGGACGACAACGA
AAACGACGATGATGGCGAGATCAGTGATCTTCTGGAGGCGTTTAATGTGT
TTGATTTGAATGGTGATGGGTTCATTTCTTGTGAAGAGCTTCAAAATGTT
TTGTCGAGGCTTGGATTATGGGATGAGAAGAGTGGCAAAGATTGTACGAG
AATGATTTGTATGTATGATACAAATTTGGATGGGGTTCTTGATTTTGAAG
AGTTCAAGAACATGATGCTGCTTTCAAAATCTTGATTCATTTTTCTGTAA
ATAAAAGATTCTGATGAAGTTTGCGGGTTCCTGCGATCAGCTTTCAACTC
AT
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