CX675721

Overview
NameCX675721
Unique NameCX675721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3314 contig Csv1_Contig3314:29..546. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX675721 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.348e-31
Identity = 77/107 (71.96%), Postives = 77/107 (71.96%), Query Frame = -3 
Query:  133 MAKNVAQSPLERTSLASLDHKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 453
            MAK    SPLER SLASLD KLA AKRCSHE                 IPTLASVRMLPWARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct:    1 MAKG--NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105
The following BLAST results are available for this feature:
BLAST of CX675721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.348e-3171.96Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_64C12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64C12-E24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675721 ID=CX675721; Name=CX675721; organism=Citrus sinensis; type=EST; length=518bp
TGGAATGGAAACCCATCTTTTATTTATACGTAGATAACGGATATACATCC
TAAGTTGGTTATTGGAATATGATGATAACGCAGTACAACATAAGCGAATC
ATATAATCATTTAATTAGCAATTCAAAACCTATGCTTCCATGTTAGAGGC
TTGCTGGAAGGAGTTTTTTCGTGCTGTGGCCAGAACAGTCTTGTCAGCCA
CAATGAAATATGCCGCTCCAGCCACTGTTGAGATAATAAGAGCTTGAGCA
GTGTGATTGAGGTTGGCTCTAGCCCAAGGAAGCATCCTCACACTCGCGAG
CGTTGGAATGGCAGTAGCAACCGTAGCAACAACAGCTGCCTTAGCTCCCG
CAATTACACCCTCATGAGAGCAACGCTTAGCCATAGCCAGTTTATGGTCA
AGTGAAGCCAAGCTGGTCCTTTCAAGAGGAGACTGAGCTACATTCTTTGC
CATTGTTTGAGAAAGTTAAAATGGAGAATATGTTAATAATGAGCTGAGGA
AATTGACGAGGCTGTGTT
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