CK939710

Overview
NameCK939710
Unique NameCK939710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939710 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.905e-13
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 3 
Query:    3 ERVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 119
            +RVAN++IYD+DIAI+A+GPIQ LPDYN FRRRTYWNRY
Sbjct:  493 KRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
The following BLAST results are available for this feature:
BLAST of CK939710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MPPB_ARATH4.905e-1379.49Probable mitochondrial-processing peptidase subuni... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004746_F08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939710 ID=CK939710; Name=CK939710; organism=Citrus sinensis; type=EST; length=428bp
GGGAGCGCGTTGCAAACAGATTTATTTACGACAGGGATATCGCAATTGCT
GCAATGGGTCCAATTCAAGGTTTACCCGACTACAACTGGTTCAGACGCAG
AACCTACTGGAATAGATACTAAGTTATCTCATGGTTGTTCATTACTGCAT
CCCCGCCTTCCTGGGCGGAGATTTCAAACAATTTTTGGGTTGCAATTTAC
ACAATCAATGCCCTTGGGAGAGGCTTCAGGGCTATGGTATTTTATTGAAT
TCTTTTCTAGCTCTTGCTTCTGTAACTTCATAATTTGTTCAGGAAATAAG
TAAGCTGTCTTCACTCTTCAGTGATTTGGCCCTCGGATTTTCATTGCTTT
GAGCTTAACAGCTCAAGTGACAGCTTTGAATGATGATAAATTTTCAGCTC
CAAAAAAAAAAAAAAAAAAAAAAAAAAA
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