CK939708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 3.809e-59 Identity = 117/136 (86.03%), Postives = 123/136 (90.44%), Query Frame = 2 Query: 251 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGALP-VVGSPGDMPLYYVPPQHPVGH 655 MFW+NQMQEIE T DFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKG +P VVGSP P YY+ Q + H Sbjct: 57 MFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQGMMQH 189
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.087e-53 Identity = 102/144 (70.83%), Postives = 122/144 (84.72%), Query Frame = 2 Query: 254 FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-VTKGALPVVGSPGDMPLYYVPP-QHPVGHTGMIMGKP 679 FW NQ +EIE+T DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG + +G +P + G P Y+P P+G+ GM+MG P Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAG-YPYGYLPAGTAPIGNPGMVMGNP 204
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.024e-52 Identity = 99/143 (69.23%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 251 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKP 679 +FW+ Q QEIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E V G + V + +P YY P P G GM++G+P Sbjct: 46 LFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMMIGRP 187
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.238e-51 Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 254 FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGALPVVGSPGDMPLYYVPP-QHPVGHTGMIMGKP 679 FW Q +EIE+T DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG G + P Y+PP P+G+ GM+MG P Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG---GVGAEAATAAGYPYGYLPPGTAPIGNPGMVMGNP 191
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.111e-50 Identity = 100/154 (64.94%), Postives = 120/154 (77.92%), Query Frame = 2 Query: 251 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE--GLGVTKGALPVVGSPGDMPLYYVPPQHPVGHTGMIMGKP-VDQAALYS 703 MFW+ Q QEIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR+E+KEE G V + +P YY P P GM++G+P +D + +Y+ Sbjct: 59 MFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQPAVPGGMMIGRPAMDPSGVYA 212
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.402e-37 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 80 YPPYQTAPLVASGTPAVAVPSPTQP------PSTFASSPXXXXXXXXXXXXXXXXXXXXXXXXM-FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELK 556 YP + +GTPA++ PS T P P+T S+P FWS+Q+++I +T DFK H LPLARIKKIMK+D+DV IS+EAP++FAKACE+ ILE+T RSW+HTE NKRRTLQ+ DI ++SR + FDFL+D++PRDE+K Sbjct: 187 YPSLNDSSSNGNGTPALSSPSSTTPHPTTPHPTTPTSTPNQRFQSNGSSSFQNQLQNHLENKLSSFWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHTEMNKRRTLQRTDIINSLSRCETFDFLIDMLPRDEIK 352
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.318e-35 Identity = 77/161 (47.83%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 254 FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGALPVVGSP--GDMPLYYVPPQHPVGHTGMIMGKPVDQAALYSGQQPRPPVA 730 +W QM+ + +DFKN LPLARIKKIMKAD DV M+SAEAP+IFAKACEMFI++LT+RSW+ EENKR TLQK+DI+ A++ + +DFL+D++P+D E + + P G +P YY PP G++MG P+ + +Y+ Q P A Sbjct: 39 YWIEQMETV---SDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKD----ESIATADPGFVAMPHPDGGGVPQYYYPP-------GVVMGTPMVGSGMYAPSQAWPAAA 185
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.457e-34 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 254 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELK 556 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+DI+PRDELK Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.457e-34 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 254 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELK 556 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+DI+PRDELK Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of CK939708 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.457e-34 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 254 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELK 556 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+DI+PRDELK Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124 The following BLAST results are available for this feature:
BLAST of CK939708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939708 ID=CK939708; Name=CK939708; organism=Citrus sinensis; type=EST; length=831bpback to top |