CX675719

Overview
NameCX675719
Unique NameCX675719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 2.123e-85
Identity = 147/208 (70.67%), Postives = 172/208 (82.69%), Query Frame = -3
Query:  317 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTTNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGSHGRNGTITNGTS-LAPSSNTTTSGCSPKYVYG-----GDLVTSSVIFSVALM 922
            HV++ TGTPKHPG AV+TYIYELYNED RPG VSEKNWGLF  NG PVYTL L GAG +LANDTTNQTFC+AK+  D+KMLQAALDWACGPGKVDCSAL+QG+ CYEPD+V++HSTYAFNAYYQ+M KA G+CDFKGVAT+TTTDPS G+C+FPGS   N T+ N TS LAPS+N+TTSGC PKY +      GDL   S++  +AL+
Sbjct:  292 HVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAGAGAILANDTTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSNQTLGNNTSALAPSANSTTSGCIPKYYHHPHASFGDLTLLSLLLIIALV 499          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.886e-71
Identity = 126/180 (70.00%), Postives = 148/180 (82.22%), Query Frame = -3
Query:  389 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTTNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGS--HGRNGTITNGTSLAPSSNTTTS 922
            HVL+ TGTPK PGIAVSTYIYELYNED + G +SEKNWGLFNANG PVY L LT +G+VLANDTTNQT+C A++GAD KMLQAALDWACGPGK+DCS + QG+ CYEPDNV++H+ YAF+ YY Q    P  C+F GVA+ITTTDPSHG+C+F GS  +GRNGT  N T  APS+N+TTS
Sbjct:  301 HVLNKTGTPKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVYVLRLTNSGSVLANDTTNQTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFAGSRGNGRNGTSVNIT--APSANSTTS 477          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 4.307e-62
Identity = 109/181 (60.22%), Postives = 133/181 (73.48%), Query Frame = -3
Query:  389 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTTNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGSH---GRNGTITNGTSLAPSSNTTTS 922
            HV   TGTP HP +  S YIYEL+NEDLR   VSE +WGLF  N  PVY LH++G+GT LANDTTNQT+C+A DG D K LQAALDWACGPG+ +CS +  G+ CY+P+NV  H+++AFN+YYQ+  +A G+CDFKGVA ITTTDPSHGSCIFPGS     R  T+ N T +A    T+ S
Sbjct:  204 HVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQTVVNSTEVAAGEATSRS 384          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.625e-43
Identity = 93/200 (46.50%), Postives = 121/200 (60.50%), Query Frame = -3
Query:  320 VLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTTNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGSHGRNGTITNGTSLAPSSNTTTSGCSPKYVYGGDLVTSSVIFSVAL 919
            VL+N+G P  P I ++TYIYELYNED R G VSE+NWG+   NG  VY L L+G  +  A + ++  FCVAK  AD   L   L+WACG G+ +C+A+  GQPCY P++V SH+++AFN YYQ+M  A GTCDF G A  TT DPS+ +C + GS   N   TNG       N       P    GG+   + +IFS  L
Sbjct:  296 VLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSSM-FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYTGS--LNANATNG-------NFPPDALGPASPLGGN-ANARIIFSYHL 484          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.337e-38
Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = -3
Query:  434 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTTNQT------------------------------FCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIF---PGSHGRNGTI 922
            HV+ + GTP  PG  +  Y++ L+NE+ +PG  SE+NWG+F ANG  VY L  TG  T   + T + T                              +C+A   A    LQ ALDWACGPG VDCSA+   QPC+EPD V+SH++YAFN YYQQ   +   C F G +     DPS+G+C++   P + G N T+
Sbjct:  293 HVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAPATDGFNRTM 488          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.152e-37
Identity = 71/182 (39.01%), Postives = 109/182 (59.89%), Query Frame = -3
Query:  398 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLANDTT-------NQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGSHGRNGTITNGTSLAPSSNT 922
            HV++N GTP  PG A++ YI+ L+NE+ + G  SE+NWGLF  +   VY L  TG      ++++       + ++C+A   A ++ L+ ALDWACGPG VDC+A+   QPC++PD ++SH+++ FN+Y+QQ       C F G       DPS+  CI+  + G     TN T+L  S++T
Sbjct:  294 HVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSNGFHSNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATALTSSAST 475          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 6.263e-37
Identity = 79/209 (37.80%), Postives = 120/209 (57.42%), Query Frame = -3
Query:  305 HVLSNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHL---TGAGTVLANDTTNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGSHGRNGTITNGTSLAPSSNTTTSGCSPKYVYGGDLVTSSVIFSVALMTAVF 922
            H+ S  GTP  PG  V TYI+ LY+E+L+PG  SE+ +GLF  +   VY + L   + +    +   T+  +CV K GA  + LQA+LDWACG G +DC A+  G  C+EP+NV+SH+ YA N Y+Q+  K P  CDF   AT+T+ +PS+ +C++PG  G  G    G+    +   ++     K       V+SS+ F +  ++ +F
Sbjct:  293 HLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSSSQTPSGKVTSSGWCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGGGGGGGGGGGSKAVMNKYVSSDKVEKKNGATEPKVSSSLSFLLIFLSLIF 500          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 61/163 (37.42%), Postives = 93/163 (57.06%), Query Frame = -3
Query:  470 SNTGTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTVLA-----NDTTNQT----------FCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSC 913
            S  GTP  P     TY++ L++E+ +PG ++E+++GLFN +  PVY L L   G  +A     N + N +          +CVAKDGA+   LQ  +++ACG   VDC  +  G  C+ P+++ +H++Y  NAYYQ        CDFKG   +T++DPS+G C
Sbjct:  297 SGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACG--FVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGC 457          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25
Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = -3
Query:  461 GTPKHPGIAVSTYIYELYNEDLRPGSVSEKNWGLFNANGVPVYTLHLTGAGTV-----LANDTTN-----QTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFP 904
            GTP  PG+ + T+++ L+NE+ + GS ++++WG+ + +G P+Y +  TG   +     L   T N     Q +CV  +GA++  L+  L  AC      C+AL  G+ CYEP ++  H++YA N+Y+ Q       C F G+A  TTT+P +  C FP
Sbjct:  317 GTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFP 474          
BLAST of CX675719 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  356 TNQTFCVAKDGADKKMLQAALDWACGPGKVDCSALLQGQPCYEPDNVISHSTYAFNAYYQQMAKAPGTCDFKGVATITTTDPSHGSCIFPGS-HGRNG--TITNGTSLAPSSNTTTS--GCSPKYVYGGD 730
            ++ ++CV K G    +LQA LD+ACG G  DC+     Q C+ PDNV SH  YA N+++Q+  ++PG+C+F G AT T +DPS+  C FP S  G +G  T+T GT+    S TTT+  G      Y G+
Sbjct:   17 SSASWCVCKTGLSDTVLQATLDYACGNG-ADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTNPKGSPTTTTLPGSGTNSPYSGN 145          
The following BLAST results are available for this feature:
BLAST of CX675719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
E133_ARATH2.123e-8570.67Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E132_ARATH3.886e-7170.00Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH4.307e-6260.22Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E134_ARATH2.625e-4346.50Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E1312_ARATH4.337e-3839.80Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1313_ARATH2.152e-3739.01Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E137_ARATH6.263e-3737.80Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT4.974e-2637.42Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
EA6_ARATH1.890e-2534.81Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13L2_ARATH2.162e-2142.31Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_64C10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64C10-E20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675719 ID=CX675719; Name=CX675719; organism=Citrus sinensis; type=EST; length=924bp
TTTTTTTTTTACTGGTTAAAATGCACACTTCAGAATTCCACTATAAAGAA
TACAACCGAATTCATCCTAACAAGGTAGTTACAATAACGATTCCTGAAGA
AATCCTTTGTTCTGTTTGTACAAAATCGAATGAACTTATCATAGAAATTA
GCCTGCCATATGTTCAATTAACTTTGACACCCCACATCTCTTCGGGAGGA
CCAAAATTGGGTGTACTCAGTGTTTTCTGACAGAAACGAGAATGGATATT
TCTCAAAGATCCCACTGCCGGAACAAATTCCAAGAAAGACAAATCTTTCT
ACAAAAAAACTGCAGTCATGAGTGCAACGCTGAAAATCACAGAGCTTGTG
ACAAGATCACCACCGTAGACATATTTTGGAGAGCAGCCAGAAGTTGTAGT
ATTTGAGGAAGGAGCCAGTGATGTTCCATTTGTAATGGTGCCATTTCTTC
CATGGCTTCCTGGAAATATACAAGAACCATGACTTGGGTCAGTGGTAGTA
ATTGTAGCAACCCCCTTGAAATCACAGGTCCCAGGAGCTTTAGCCATCTG
TTGATAATATGCATTGAAAGCATATGTTGAATGTGAAATCACATTATCTG
GCTCATAACATGGCTGACCCTGCAGCAAGGCTGAGCAATCAACTTTTCCT
GGACCACAAGCCCAATCCAGAGCAGCCTGTAGCATCTTTTTATCAGCACC
ATCCTTGGCAACACAGAAGGTTTGATTTGTCGTATCATTCGCCAAAACAG
TTCCAGCCCCGGTCAAGTGTAAGGTATAAACCGGTACTCCATTGGCATTA
AATAGCCCCCAGTTCTTTTCAGAGACAGACCCTGGTCTCAGATCCTCATT
GTAAAGCTCATAAATATAAGTACTAACTGCAATCCCTGGGTGTTTAGGAG
TTCCTGTGTTGCTAAGCACGTGTC
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