CX675716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_ORYSJ (Lysyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14 Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPT GWGLGIDRL MLLTDSQNIKEVLLFPAM Sbjct: 562 LEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 598
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_HUMAN (Lysyl-tRNA synthetase OS=Homo sapiens GN=KARS PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPTAGWG+GIDR+AM LTDS NIKEVLLFPAM Sbjct: 537 LEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAM 573
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_MOUSE (Lysyl-tRNA synthetase OS=Mus musculus GN=Kars PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.134e-13 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPTAGWG+GIDRL M LTDS NIKEVLLFPAM Sbjct: 535 LEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAM 571
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_CRIGR (Lysyl-tRNA synthetase OS=Cricetulus griseus GN=KARS PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPTAGWG+GIDR+ M LTDS NIKEVLLFPAM Sbjct: 537 LEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAM 573
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_CAEEL (Lysyl-tRNA synthetase OS=Caenorhabditis elegans GN=krs-1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.785e-12 Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPT GWG+GIDRL+M+LTD+ NIKEVLLFPAM Sbjct: 517 LEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAM 553
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_SOLLC (Lysyl-tRNA synthetase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.157e-11 Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPT G G+GIDRL MLLTDSQN+KEV+LFPAM Sbjct: 549 LEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAM 585
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYK_ARATH (Lysyl-tRNA synthetase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.157e-11 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGL PT GWGLGIDRL+MLLTDS NIKEVL FPAM Sbjct: 571 LEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFPAM 607
BLAST of CX675716 vs. ExPASy Swiss-Prot
Match: SYKC_YEAST (Lysyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=KRS1 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11 Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 3 Query: 3 LEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 113 LEYGLPPT GWG GIDRLAM LTDS I+EVLLFP + Sbjct: 540 LEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFPTL 576 The following BLAST results are available for this feature:
BLAST of CX675716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675716 ID=CX675716; Name=CX675716; organism=Citrus sinensis; type=EST; length=415bpback to top |