CX675715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_ORYSJ (Lysyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPT GWGLGIDRL MLLTDSQNIKEVLLFPAM Sbjct: 561 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 598
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_HUMAN (Lysyl-tRNA synthetase OS=Homo sapiens GN=KARS PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPTAGWG+GIDR+AM LTDS NIKEVLLFPAM Sbjct: 536 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAM 573
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_MOUSE (Lysyl-tRNA synthetase OS=Mus musculus GN=Kars PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13 Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPTAGWG+GIDRL M LTDS NIKEVLLFPAM Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAM 571
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_CRIGR (Lysyl-tRNA synthetase OS=Cricetulus griseus GN=KARS PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.659e-13 Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPTAGWG+GIDR+ M LTDS NIKEVLLFPAM Sbjct: 536 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAM 573
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_CAEEL (Lysyl-tRNA synthetase OS=Caenorhabditis elegans GN=krs-1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.084e-13 Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPT GWG+GIDRL+M+LTD+ NIKEVLLFPAM Sbjct: 516 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAM 553
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_SOLLC (Lysyl-tRNA synthetase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPT G G+GIDRL MLLTDSQN+KEV+LFPAM Sbjct: 548 ALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAM 585
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYK_ARATH (Lysyl-tRNA synthetase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGL PT GWGLGIDRL+MLLTDS NIKEVL FPAM Sbjct: 570 ALEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFPAM 607
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYKC_YEAST (Lysyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=KRS1 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.339e-11 Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPT GWG GIDRLAM LTDS I+EVLLFP + Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFPTL 576
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: SYKC_SCHPO (Lysyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=krs1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALEYGLPPT GWG+G+DRL M LTDS I+EVLLFP M Sbjct: 540 ALEYGLPPTGGWGMGVDRLVMFLTDSNTIREVLLFPHM 577
BLAST of CX675715 vs. ExPASy Swiss-Prot
Match: GPA_LEIDO (Putative guanine nucleotide-binding protein subunit alpha OS=Leishmania donovani PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11 Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = -3 Query: 304 ALEYGLPPTAGWGLGIDRLAMLLTDSQNIKEVLLFPAM 417 ALE+ LPPT GWGLGIDRL M LT NIKEVLLFPAM Sbjct: 287 ALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFPAM 324 The following BLAST results are available for this feature:
BLAST of CX675715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675715 ID=CX675715; Name=CX675715; organism=Citrus sinensis; type=EST; length=419bpback to top |