CK939684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CITSI (30S ribosomal protein S19, chloroplastic OS=Citrus sinensis GN=rps19 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.975e-36 Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KIDKLNTKAE IITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR Sbjct: 18 KIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_EUCGG (30S ribosomal protein S19, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps19 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.518e-35 Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLPIYITDRMVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_CARPA (30S ribosomal protein S19, chloroplastic OS=Carica papaya GN=rps19 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.289e-35 Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNGREHLP+YITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 18 KIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PLAOC (30S ribosomal protein S19, chloroplastic OS=Platanus occidentalis GN=rps19 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.327e-35 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDNRSRR Sbjct: 18 KIEKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTMNFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_SOYBN (30S ribosomal protein S19, chloroplastic OS=Glycine max GN=rps19 PE=3 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 1.250e-34 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE IITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 18 KINKLNTKAEKDIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_GOSHI (30S ribosomal protein S19, chloroplastic OS=Gossypium hirsutum GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.250e-34 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI++LNTKAE IITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 18 KIERLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_GOSBA (30S ribosomal protein S19, chloroplastic OS=Gossypium barbadense GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.250e-34 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI++LNTKAE IITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 18 KIERLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_POPTR (30S ribosomal protein S19, chloroplastic OS=Populus trichocarpa GN=rps19-1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.632e-34 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDN+SRR Sbjct: 18 KINKLNTKAEKNLIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_POPAL (30S ribosomal protein S19, chloroplastic OS=Populus alba GN=rps19 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.632e-34 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDN+SRR Sbjct: 18 KINKLNTKAEKNLIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR 92
BLAST of CK939684 vs. ExPASy Swiss-Prot
Match: RR19_PHAVU (30S ribosomal protein S19, chloroplastic OS=Phaseolus vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.132e-34 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 7 KIDKLNTKAEXXXIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 231 KI+KLNTKAE I+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 18 KINKLNTKAEKDIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92 The following BLAST results are available for this feature:
BLAST of CK939684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939684 ID=CK939684; Name=CK939684; organism=Citrus sinensis; type=EST; length=287bpback to top |