CK939675

Overview
NameCK939675
Unique NameCK939675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2505 contig Csv1_Contig2505:54..849. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 375.17 bits (962), Expect = 2.347e-103
Identity = 180/229 (78.60%), Postives = 206/229 (89.96%), Query Frame = 1
Query:  118 MGKGGMSQGE---KKDGEEVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            MGKGG S+     K+ GEE NMAAWL+G+ TLKIQP+ LPSLGPYDV VR+KAVGICGSDVH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRAN+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LG
Sbjct:    1 MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLG 228          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 228.409 bits (581), Expect = 3.549e-59
Identity = 110/209 (52.63%), Postives = 150/209 (71.77%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT+L A+A GA ++V++D+   RL+ AKE+G
Sbjct:    9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 7.906e-59
Identity = 109/209 (52.15%), Postives = 150/209 (71.77%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+G
Sbjct:    9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.032e-58
Identity = 112/209 (53.59%), Postives = 147/209 (70.33%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+G
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 226.868 bits (577), Expect = 1.032e-58
Identity = 111/209 (53.11%), Postives = 147/209 (70.33%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+G
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.348e-58
Identity = 110/209 (52.63%), Postives = 148/209 (70.81%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V++L A+A GA ++V+ D+   RLS AKE+G
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 3.004e-58
Identity = 111/209 (53.11%), Postives = 148/209 (70.81%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV++L A+A GA ++V+ D+   RLS AKE+G
Sbjct:    8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVG 216          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57
Identity = 110/209 (52.63%), Postives = 147/209 (70.33%), Query Frame = 1
Query:  169 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV +L A+A GA ++V+ D+   RLS AKE+G
Sbjct:    7 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVG 214          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 7.657e-54
Identity = 95/207 (45.89%), Postives = 138/207 (66.67%), Query Frame = 1
Query:  175 AAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 795
            AA +     +KI+   +P +   +VL+++ AVGICGSD+HY    R  ++VV++P ++GHECAG I  VGS V     GDRVA+EPG++C RC+ CK GRYNLCP+++F ATPPV G+    +    D  F +PD++S EE A+ EP SVG+HA  R  + P + + IMG GP+GL+ +  A+AFGA  I++ D++  RL  AK++G
Sbjct:   11 AAVMHNTREIKIETLPVPDINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEIAAVGSSVDQFKVGDRVAVEPGVTCGRCEACKEGRYNLCPDVQFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMG 217          
BLAST of CK939675 vs. ExPASy Swiss-Prot
Match: DHSO_SCHPO (Putative sorbitol dehydrogenase OS=Schizosaccharomyces pombe GN=tms1 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.652e-48
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 1
Query:  241 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE 789
            + V V +KA GICGSDVHY K     DF++K+PM++GHE AGV+ +VG  V +L PGD VA+EPG  C  CD+C+ GRYNLCP M+F ATPP  G+L    +   D C KLP  +S+EEGA+ EP+SV +HA  R N+   + VL+MG G +GL+ M  A+A+GA  IV VD    R+  A++
Sbjct:   30 HQVKVAIKATGICGSDVHYWKEGGIGDFILKKPMILGHESAGVVVEVGKGVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPYDGTLRTYYITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAKAYGAIDIVAVDASPSRVEFAQK 212          
The following BLAST results are available for this feature:
BLAST of CK939675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
IDND_VITVI2.347e-10378.60L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_RAT3.549e-5952.63Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_MOUSE7.906e-5952.15Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_PONAB1.032e-5853.59Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_HUMAN1.032e-5853.11Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_MACFA1.348e-5852.63Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_BOVIN3.004e-5853.11Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_SHEEP5.665e-5752.63Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_BACSU7.657e-5445.89Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]
DHSO_SCHPO1.652e-4850.27Putative sorbitol dehydrogenase OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004747_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939675 ID=CK939675; Name=CK939675; organism=Citrus sinensis; type=EST; length=796bp
GCGGCCGAATCAAATCATATCCCATATCCAGAATCAGAATAAATGGTAGC
TTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTTTTG
AAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAAAAG
AAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAACAC
CCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATGATGTTT
TAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTATCTC
AAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGATTGG
GCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGACTT
TGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGGCGA
TGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAAATT
TTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGCATC
CTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAAGGG
GCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGCCAA
TATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCATAGGAC
TTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATTGTCATT
GTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGGTG
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