CK939670

Overview
NameCK939670
Unique NameCK939670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9501 contig Csv1_Contig9501:60..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.383e-30
Identity = 81/252 (32.14%), Postives = 126/252 (50.00%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSVWEWCGSALAE---GAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R+++    V  +++YPIKSC+G+SV +    T  G R     DR WMV+  +G   T R EP+L LV   L N            +++ + APGM+ + + +  P   ++ +      G  +     G E + WFTNYL   + RLV+++   + R          Y    ++ + DC P  L+S+ SL  LN  LK+ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T + DTG+
Sbjct:   49 RQLQQVGTVSKVWIYPIKSCKGVSVCE-TECTDMGLRCGKVRDRFWMVVKEDGHMVTARQEPRLVLVSITLEN------------NYLTLEAPGMEQIVLPIKLPS--SNKIHNCRLFGLDIKGRDCGDEVAQWFTNYLKTQAYRLVQFDTSMKGRTTKKLYPSESYLQNYEVAYPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGI 285          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 84/249 (33.73%), Postives = 125/249 (50.20%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKI--SLSKPRDLADGVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESETRP---VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R+++    V  +++YPIKSC+G+SV   A  T  G R     DR W+VI  +G   T R EP+L LV     ++             +++RAPGM  L +   L     L D   V+         G EA+ WFT++L   + RLV++    + R    + P      ++ + DC P M+LS+ SL  LN  +++ + IN FRPNI+V GC  F ED W  + I N   + +  C RC + T + DTGV
Sbjct:   49 RRLQQVGTVSELWIYPIKSCKGVSVDA-AECTALGLRSGHLRDRFWLVIKEDGHMVTGRQEPQLVLVSITYEDDC------------LILRAPGMDQLVLPTKLLSSNKLHD-CRVFGLDIQGRDCGDEAAQWFTSFLKTDAFRLVQFEKNMKARASNEIFPSLDKNYQVAYPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGV 283          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.967e-30
Identity = 79/252 (31.35%), Postives = 128/252 (50.79%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSVWEWCGSALAE---GAEASNWFTNYLGKPS-RLVRYNAESETRPV-----DPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R+++    V  +++YPIKSC+G+SV +    T  G R     DR WMV+  +G   T R EP+L LV   L N            +++++ APGM+ + + +  P   ++ +      G  +     G E + WFT+YL   + RLV+++ + + R          Y    ++ + DC P  L+S+ SL  LN  L++ + +  FRPNI+V GCE F ED W  + I +   + V  C RC + T + DTG+
Sbjct:   49 RQLQQVGTVSKVWIYPIKSCKGVSVCE-TECTDMGLRCGKVRDRFWMVVKEDGHMITARQEPRLVLVTITLEN------------NYLMLEAPGMEPIVLPIKLPS--SNKIHDCRLFGLDIKGRDCGDEVARWFTSYLKTQAYRLVQFDTKMKGRTTKKLYPSESYLQNYEVAYPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGI 285          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.442e-27
Identity = 80/250 (32.00%), Postives = 123/250 (49.20%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSV-WEWCGSALAEGAEASNWFTNYL-GKPSRLVRYNAESETRPVDPKYAAG-----EKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R ++    V  +++YP+KSC+G+ VS+ A  T  G R     DR W+VIN  G   T R EP+L L+      +        T    + I+ P   A+       +    G+ +    CG A A+      W T++L  +P RLV +  E   RP  P   A      ++I +SD  PF++LS+ SL  LN  L++ +    FRPNI++ GC+ ++ED W  + I +   + V  C RC + T + DTGV
Sbjct:   50 RLLQQVGTVAQLWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFWLVINQEGNMVTARQEPRLVLISLTCDGDTLTLSAAYTKDLLLPIKTPTTNAVH------KCRVHGLEIEGRDCGEATAQ------WITSFLKSQPYRLVHF--EPHMRPRRPHQIADLFRPKDQIAYSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGV 284          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.105e-27
Identity = 76/248 (30.65%), Postives = 122/248 (49.19%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGVA 738
            R+++    V  +++YPIKSC+G+SVS+ A  T  G R+    DR W+VIN  G   T R EP+L L+     ++        T    + I  P    L         L   V   E  G    E  +A+ W +++L   S RLV +        +R +   +   +++ +SD  PF++LS+ SL+ LN  L+  +    FRPNI++ GC  ++ED W  + I +   + V  C RC + T + DTG++
Sbjct:   53 RRLQQVGTVAQLWIYPIKSCKGLSVSE-AECTAMGLRYGHLRDRFWLVINEEGNMVTARQEPRLVLISLTCEDDTLTLSAAYTKDLLLPITPPATNPL---------LQCRVHGLEIQGRDCGE--DAAQWVSSFLKMQSCRLVHFEPHMRPRSSRQMKAVFRTKDQVAYSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGIS 288          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 74/248 (29.84%), Postives = 122/248 (49.19%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPR-DLADGVSVWEWCGSALAEGAEASNWFTNYLGKPS-RLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R+++    V  +++YP+KSC+G+ VS+ A  T  G R     DR W+VI  +G   T R EP+L L+     N              ++ RAP M  L +   +P  +      ++         G EA+ WFTN+L   + RLV++    +   +R + P      ++ + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + V  C RC + T + DTGV
Sbjct:   49 RRLQQVGTVAKLWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLVLISIIYENNC------------LIFRAPDMDQLVLPSKQPSSNKLHNCRIFGLDIKGRDCGNEAAKWFTNFLKTEAYRLVQFETNMKGRTSRKLLPTLDQNFQVAYPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGV 283          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.026e-25
Identity = 73/248 (29.44%), Postives = 122/248 (49.19%), Query Frame = 1
Query:   19 RKMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPR-DLADGVSVWEWCGSALAEGAEASNWFTNYLG-KPSRLVRYNAESE---TRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            R+++    V  +++YP+KSC+G+ VS+ A  T  G R     DR  +VI  +G   T R EP+L LV     N              ++ +AP M  L +   +P  +      ++         G EA+ WFTN+L  +  RLV++    +   +R + P      ++ + DC P ++++  SL  LN  +++ + +  FRPNI+V GC+ F ED W  + I +   + +  C RC + T + DTGV
Sbjct:   49 RRLQQVGTVAKLWIYPVKSCKGVPVSE-AECTAMGLRSGNLRDRFLLVIKEDGHIVTARQEPRLVLVSITYENNC------------LIFKAPDMDQLVLPSKQPSSNKLHNCRIFGLDIKGRDCGNEAAQWFTNFLKTEVYRLVQFETNMKGRTSRKLLPTLDQNYQVAYPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGV 283          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25
Identity = 71/244 (29.10%), Postives = 118/244 (48.36%), Query Frame = 1
Query:   43 VKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSVWEWCGSALA---EGAEASNWFTNYL--GKPSRLVRYNAE----SETRPVDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            V  + +YP+KSCR + V Q+A  +  G +     DR W+V+   G   T R EP++ L+                    + +  P MQ ++I L  P+  ++ V      G  +     G +AS W   Y    +P RLV + A+     +++  +  +   + I + D  P MLLS+ S++ALN  L++P+ +  FRP I+  GCE F+ED W  +++     + V  C RC + T N ++GV
Sbjct:   60 VSQLLIYPVKSCRAVPV-QEAECSALGLKSGHLEDRHWLVVTEEGNMVTARQEPRMVLISATFCGNT------------LCLNGPEMQEVQIPLPLPK--SNRVLDCRVFGQDIQGRDSGEQASEWLATYFQSSQPYRLVHFEADVMRPRQSKKKEKLFRDKDVIAYPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGV 288          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.139e-23
Identity = 75/247 (30.36%), Postives = 118/247 (47.77%), Query Frame = 1
Query:   22 KMEAAAKVKSIFVYPIKSCRGISVSQQAPLTPTGFRW----DRQWMVINNNGRAYTQRNEPKLALVETELPNEAFLEGWEPTGRSFMVIRAPGMQALKISLSKPRDLADGVSVWEWCGSALAEGAEASNWFTNYL--GKPSRLVRYNAESET-RP--VDPKYAAGEKIMFSDCYPFMLLSQGSLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTGV 735
            K+     V  + V+P+KS + +SV + A     G ++    DR W+VI  +G   T R +P+L LV          EG        + +  P M+ LK  L+   DL     V+         G + S W T +L   KP RLV Y  + +  RP   +P +   +++ + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+ED W  I+I     + V  C RC   T + +TGV
Sbjct:   43 KLTRVGVVTKLLVHPLKSGKAVSV-EAAECLRMGLKYGELRDRHWLVITEDGHMVTGRQQPRLVLVSLTC------EG------GHVSLNGPQMEELKFPLNNSSDLVVDCRVFSVDVQGRDCGDKVSEWLTRFLEADKPVRLVHYEPDLKPQRPHEKEPLFPKDDEVAYPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGV 276          
BLAST of CK939670 vs. ExPASy Swiss-Prot
Match: MOCOS_ORYSJ (Molybdenum cofactor sulfurase OS=Oryza sativa subsp. japonica GN=MCSU3 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23
Identity = 77/249 (30.92%), Postives = 123/249 (49.40%), Query Frame = 1
Query:   43 VKSIFVYPIKSCRGISVSQQAPLTPTGFRWDRQWMVINNNGRAYTQRNEPKLALVETELPNEA---FLEGWEPTGRSFMVIRAPGMQALKISLSKP-RDLADGVSVWEWCGSALAEGAEASNWFTNYLGKPSRLVR-----YNAESETRPVD-PKYAAGEKIMFSDCYPFMLLSQGSLDALNKLL---------KEPIPINRFRPNILVDGCEPFSEDLWTGIQINNCTFQGVKLCDRCKVPTXNQDTG 732
            +KSI +YP+KSC+G SV    PLT  G  +DR+W++  + G   TQ+  P+L  + T +  E    F+E   PT R            L++SL +   DL++ V V+       +     + WF+  +G+P  LVR     Y + + T   D P      K+ F +    +L+S+ S+  LN  L         K P+   RFRPN+++ G  P+SED W  ++I    F  +  C+RC++   +QD+G
Sbjct:  532 LKSIIIYPVKSCQGFSVKSW-PLTTGGLMYDREWLLQGSGGEILTQKKVPELGSIRTLIDLELGKLFIES--PTRRD----------KLQLSLLESLADLSEEVDVFGQRYEVQSYDDRVNTWFSEAIGRPCTLVRCSSSKYRSCTYTGLRDRPCRDTQSKLNFVNEGQLLLISEESISDLNSRLNSGKGDCKQKLPVDAMRFRPNLVISGSSPYSEDNWKKLRIGEACFTSMGGCNRCQMINLHQDSG 767          
The following BLAST results are available for this feature:
BLAST of CK939670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
MOSC2_MOUSE1.383e-3032.14MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_BOVIN4.025e-3033.73MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT8.967e-3031.35MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_HUMAN2.442e-2732.00MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_MOUSE7.105e-2730.65MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_HUMAN3.526e-2629.84MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MACFA1.026e-2529.44MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_XENLA2.286e-2529.10MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_DANRE2.139e-2330.36MOSC domain-containing protein 1, mitochondrial OS... [more]
MOCOS_ORYSJ6.224e-2330.92Molybdenum cofactor sulfurase OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004747_C09 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939670 ID=CK939670; Name=CK939670; organism=Citrus sinensis; type=EST; length=741bp
GGGGAGTGAGAGCTACTGAGAAAAATGGAGGCTGCAGCCAAAGTAAAATC
AATATTTGTATACCCAATTAAATCATGCAGAGGCATCTCTGTCTCTCAGC
AGGCACCCCTCACTCCTACTGGATTTCGATGGGATAGACAGTGGATGGTA
ATTAATAACAACGGGAGAGCATATACTCAGAGAAACGAGCCAAAGCTTGC
TCTGGTTGAGACAGAGTTGCCAAATGAGGCATTTTTAGAAGGATGGGAAC
CCACTGGGAGATCATTCATGGTAATAAGAGCTCCAGGGATGCAGGCTCTT
AAAATTTCACTGAGCAAACCCCGTGATTTAGCAGACGGTGTTTCCGTATG
GGAGTGGTGTGGCTCTGCACTGGCTGAGGGAGCTGAAGCTTCAAATTGGT
TTACAAATTACCTTGGGAAACCTAGTCGGCTAGTTCGTTACAATGCAGAA
TCAGAAACTAGACCTGTCGATCCCAAATATGCTGCTGGAGAGAAAATAAT
GTTTTCTGATTGTTATCCATTTATGCTGTTGTCTCAGGGATCTTTGGATG
CACTTAATAAGCTTCTCAAGGAGCCTATTCCAATTAACCGTTTTCGACCA
AACATCCTTGTTGATGGTTGTGAACCGTTTTCTGAGGACTTATGGACGGG
CATCCAAATAAACAATTGCACATTTCAAGGTGTTAAGCTGTGTGACCGCT
GTAAGGTGCCAACTNTNAATCAAGACACTGGTGTTGCTGGT
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