CX675708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.297e-38 Identity = 83/100 (83.00%), Postives = 86/100 (86.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FDQKIGVQIIQNALKTPVHTI GKLLEQDN DLGYDAAKGEYVDM+K+GIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK+EKE P Sbjct: 465 FDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKDEKEVP 564
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.484e-37 Identity = 81/100 (81.00%), Postives = 86/100 (86.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FDQKIGVQIIQNALKTPVHTI GKLLEQ+NTDLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE+I+VE+PKEE AP Sbjct: 467 FDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKTGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAP 566
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.226e-36 Identity = 80/100 (80.00%), Postives = 84/100 (84.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FDQKIGVQIIQNALKTPVHTI GKLLEQD+ DLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE +VVELPK+E E P Sbjct: 465 FDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTEVVVVELPKDENEVP 564
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.475e-36 Identity = 80/100 (80.00%), Postives = 84/100 (84.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FDQKIGVQIIQNALKTPVHTI GKLLEQ NTDLGYDAAK EYVDMVK+GIIDPLKVIRTALVDAASVSSLMTTTE+I+VE+PKEE AP Sbjct: 467 FDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAP 566
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.461e-35 Identity = 78/99 (78.79%), Postives = 85/99 (85.86%), Query Frame = -3 Query: 347 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 643 FDQKIGVQIIQNALKTPV+TI GKLLEQDN DLGYDAAKGEYVDMVK+GIIDPLKVIRTALVDAASVSSL+TTTEA+VV+LPK+E E+ Sbjct: 464 FDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVVDLPKDESES 562
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.061e-34 Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FDQKIGVQIIQNALKTPV+TI GKLLEQDN DLGYDAAKGEYVDM+K+GIIDPLKVIRTALVDAASVSSL+TTTEA+V E+P +E +P Sbjct: 465 FDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVTEIPTKEVASP 564
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.131e-33 Identity = 74/100 (74.00%), Postives = 81/100 (81.00%), Query Frame = -3 Query: 344 FDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 643 FD KIGVQIIQNALKTPV+TI GKLLE DN DLGYDAAKGEYVDMVKSGIIDP+KVIRTALVDAASVSSL+TTTEA+V E+P +E +P Sbjct: 468 FDHKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALVDAASVSSLLTTTEAVVTEIPTKEDASP 567
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23 Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = -3 Query: 344 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP 640 DQ+ GVQI+QNALK P TI GKLLEQD+ + G+DAAKG+YVDMVK+GIIDP+KVIRTAL DAASVS L+TTTEA V L K ++ P Sbjct: 465 DQRRGVQIVQNALKAPAFTIAANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIIDPVKVIRTALTDAASVSLLLTTTEASV--LVKADENTP 561
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22 Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = -3 Query: 350 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKE 640 DQKIG++II+ ALK P TI K+L Q ++++GYDA G++V+MV+ GIIDP KV+RTAL+DAA V+SL+TT EA+V E+PKEEK+ Sbjct: 460 DQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEIGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD 555
BLAST of CX675708 vs. ExPASy Swiss-Prot
Match: CH60_RAT (60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = -3 Query: 350 DQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKE 640 DQKIG++II+ ALK P TI K+L Q ++++GYDA G++V+MV+ GIIDP KV+RTAL+DAA V+SL+TT EA+V E+PKEEK+ Sbjct: 460 DQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD 555 The following BLAST results are available for this feature:
BLAST of CX675708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675708 ID=CX675708; Name=CX675708; organism=Citrus sinensis; type=EST; length=645bpback to top |