CK939607

Overview
NameCK939607
Unique NameCK939607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70
Identity = 132/205 (64.39%), Postives = 162/205 (79.02%), Query Frame = 3
Query:   78 FKSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAY--NALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARF---GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            F  PTMA+  L +  VSSA+DMSI+SYD+ H   ++  R++ EVM+++EAWLVKHGKA   N+L EK++RFEIFK+NLRF+DEHN +N +Y++GL RFADLTN+EYRS +LGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVD  T  NEGCN
Sbjct:    3 FLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCN 201          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.581e-58
Identity = 122/205 (59.51%), Postives = 151/205 (73.66%), Query Frame = 3
Query:   69 MGLFKSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            MGL KS  ++M LLF  T+   L +S+        +K+ + RT+DEV AM+E+WL+K+GK+YN+LGE E+RFEIFKE LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS +LG   G+ +T    K SNRY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+D   T    GCN
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCN 192          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 220.705 bits (561), Expect = 5.571e-57
Identity = 121/205 (59.02%), Postives = 150/205 (73.17%), Query Frame = 3
Query:   69 MGLFKSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            MGL KS  ++M LLF  T+   L +S+        +K+ + RT+DEV AM+E+WL+K+GK+YN+LGE E+RFEIFKE LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS +L    G+ +T    K SNRY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+D   T    GCN
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCN 192          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.045e-56
Identity = 113/202 (55.94%), Postives = 142/202 (70.30%), Query Frame = 3
Query:   84 SPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            S  +A   L L    +A DMSIVSY +         R+++E   ++  W  +HGK+YNA+GE+E+R+  F++NLR+IDEHN+       ++++GLNRFADLTNEEYR  +LG R   +R   + K S+RYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVD  T  NEGCN
Sbjct:    4 SMALAAAALLLLLSLAAADMSIVSYGE---------RSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCN 193          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.202e-51
Identity = 105/203 (51.72%), Postives = 141/203 (69.46%), Query Frame = 3
Query:   93 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYN----ALGEKEKRFEIFKENLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            +++ LL++    ++ D SI++ D         WRTD+EV +++  W  +HGK  N     + +++KRF IFK+NLRFID HN +N+  TYK+GL +F DLTN+EYR ++LGAR    R   K+K  N +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVD     N+GCN
Sbjct:    8 LSLLLLYVVVSLASGDESIIN-DHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCN 209          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49
Identity = 102/196 (52.04%), Postives = 139/196 (70.92%), Query Frame = 3
Query:   96 AMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT-XXNEGCN 677
            A+ +L +  +SS+L ++         +++   R + EV  M+E WLV++ K YN LGEKE+RF+IFK+NL+F+DEHNS  +RT++VGL RFADLTNEE+R+++L  +    + S+K++R   YL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQELVD      N GC+
Sbjct:   12 ALVILSVLLLSSSLGVA---------TETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTER---YLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCD 195          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 106/208 (50.96%), Postives = 136/208 (65.38%), Query Frame = 3
Query:   69 MGLFKSPTMAMFLLFLFTVS--SALDMSIVSYDKTHESKSSSWRT----DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGC 674
            MG  KS  M +FLL L   S  +A+DMS+VS +  H   +   R     D E   MFE+W+VKHGK Y+++ EKE+R  IF++NLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    SNRY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++     N GC
Sbjct:    1 MGYAKS-AMLIFLLALVIASCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLIN-CNKENNGC 206          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.122e-48
Identity = 102/207 (49.28%), Postives = 136/207 (65.70%), Query Frame = 3
Query:   78 FKSPTMAMFLLFLFTVSSAL-------DMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            F +P+++ F L +   +SAL       D SIV Y   H + +      D+++ +FE+W+ +H KAY ++ EK  RFE+F+ENL  ID+ N+E  +Y +GLN FADLT+EE++  +LG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+D  T  N GCN
Sbjct:    3 FSAPSLSKFSLLVAISASALLCCAFARDFSIVGYTPEHLTNT------DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCN 201          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.916e-47
Identity = 96/203 (47.29%), Postives = 134/203 (66.01%), Query Frame = 3
Query:   69 MGLFKSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGC 674
            MG  KS  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W+VKHGK Y ++ EKE+R  IF++NLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    S+RY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++     N GC
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLIN-CNKENNGC 199          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.594e-46
Identity = 95/184 (51.63%), Postives = 126/184 (68.48%), Query Frame = 3
Query:  126 SSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            +S+ D SIV Y            + D+++ +FE W+    KAY  + EK  RFE+FK+NL+ IDE N + ++Y +GLN FADL++EE++ M+LG +    R   + +    +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+D  T  N GCN
Sbjct:   26 ASSHDYSIVGYSP------EDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRD-EERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCN 202          
The following BLAST results are available for this feature:
BLAST of CK939607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
RD21A_ARATH9.789e-7064.39Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ACTN_ACTDE6.581e-5859.51Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH5.571e-5759.02Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ORYA_ORYSJ8.045e-5655.94Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH1.202e-5151.72Germination-specific cysteine protease 1 OS=Arabid... [more]
CPR1_ARATH1.125e-4952.04Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CPR4_ARATH3.274e-4950.96Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
XCP1_ARATH2.122e-4849.28Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CPR3_ARATH8.916e-4747.29Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
XCP2_ARATH2.594e-4651.63Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004748_C03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IVF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939607 ID=CK939607; Name=CK939607; organism=Citrus sinensis; type=EST; length=679bp
GGGGACACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAA
AAGTTCTTTTCTCAAAAGATGGGTTTGTTTAAATCACCAACCATGGCCAT
GTTTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTG
TATCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGAC
GATGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGC
TTATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAA
ATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTT
GGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCA
TCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGA
GCAACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGAT
TGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGG
GAGTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGA
TTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTNN
NNTACATNNNATAATGAAGGATGTAATGG
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