CK939605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939605 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.192e-21 Identity = 55/113 (48.67%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 113 KDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAY 451 K K E + A K+ A KA + + K A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++D ++YEK M AY Sbjct: 5 KSKTESKRADPKLAVNKKGAATKARKPAGKG-----KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAY 112
BLAST of CK939605 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.738e-21 Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 131 VKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAY 451 +K + +A K +K + K+TK A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT +YEK + AY Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKK---AVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAY 104
BLAST of CK939605 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18 Identity = 53/125 (42.40%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 80 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAY 451 MK + KGA K D VK S+ + K K K A KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++ L+Y K + AY Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAY 109
BLAST of CK939605 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 143 EDRAAGKRKAVLKASRSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAY 451 E + A + AV K ++ K K K KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ +YE + AY Sbjct: 9 ESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAY 113
BLAST of CK939605 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.277e-17 Identity = 51/124 (41.13%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 80 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXXLDYEKLMTAY 451 MK + KGA K D VK + G K K + A KDPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL++ +Y K + AY Sbjct: 1 MKGAKSKGAAKADAKLAVK-----SKGAEKPAAKGKKGK---------AGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAY 110 The following BLAST results are available for this feature:
BLAST of CK939605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939605 ID=CK939605; Name=CK939605; organism=Citrus sinensis; type=EST; length=674bpback to top |