CX675703

Overview
NameCX675703
Unique NameCX675703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1084..1834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.828e-55
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = -2
Query:  416 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKP 751
            RSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEP SVFVD+YGTGKIPDKEILKIVKE+ DFRPGMM+INLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKWEKP
Sbjct:  280 RSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKP 391          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.076e-54
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = -2
Query:  416 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKP 751
            RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVP+P SVFVDSYGTGKIPDKEILKIVKE+ DFRPGM+TINLDLKRGGN RF+K AAYGH GRDDPDFTWE+VKPLKWEKP
Sbjct:  280 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKP 391          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAY+VRQAAKSIVANGLARRCIVQVSYAIGVPEP SVFVDSYGTGKIPD+EIL+IVKE+ DFRPGM+TINLDLKRGGN RF+K AAYGH GRDDPDFTWEVVKPLKWEKP A
Sbjct:  281 RSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = -2
Query:  419 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEK 751
            RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP SVFVDSYGTGKIPDKEILKIVKE+ DFRPGM+ INLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKWEK
Sbjct:  280 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 105/114 (92.11%), Postives = 108/114 (94.74%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP SVFVD+YGTGKIPDKEILKIVKE+ DFRPGMMTINLDLKRGGN RF+K AAYGH GRDDPDFTWEVVKPLKWEKP A
Sbjct:  280 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP SVFVD+YGTGKIPD+EILKIVKE+ DFRPGM++INLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKWEK  A
Sbjct:  280 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = -2
Query:  416 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKP 751
            RSGAYIVRQAAKSIVANGLARRC+VQVSYAIGVPEP SVFVDSYGTG+IPDKEIL IVKE+ DFRPGM+TINLDLKRGGNGRF+K A YGH GRDDPDFTWE+VKPLKWEKP
Sbjct:  280 RSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKP 391          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.972e-54
Identity = 101/114 (88.60%), Postives = 107/114 (93.86%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKES DFRPGMMTINLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKW+KP A
Sbjct:  280 RSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.972e-54
Identity = 101/114 (88.60%), Postives = 107/114 (93.86%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKES DFRPGMMTINLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKW+KP A
Sbjct:  280 RSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of CX675703 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.972e-54
Identity = 101/114 (88.60%), Postives = 107/114 (93.86%), Query Frame = -2
Query:  410 RSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP*SVFVDSYGTGKIPDKEILKIVKESCDFRPGMMTINLDLKRGGNGRFMKNAAYGHLGRDDPDFTWEVVKPLKWEKPLA 751
            RSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKES DFRPGMMTINLDLKRGGNGRF+K AAYGH GRDDPDFTWEVVKPLKW+KP A
Sbjct:  280 RSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
The following BLAST results are available for this feature:
BLAST of CX675703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLTU4.828e-5591.96S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK2_ELAUM1.076e-5491.07S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK_MEDTR1.405e-5489.47S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK5_VITVI1.405e-5492.79S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK1_POPTR3.129e-5492.11S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_VITVI4.087e-5489.47S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ELAUM4.087e-5489.29S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_BRARP6.972e-5488.60S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU6.972e-5488.60S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU6.972e-5488.60S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_64B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64B08-C16-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675703 ID=CX675703; Name=CX675703; organism=Citrus sinensis; type=EST; length=752bp
TTTTAGGCAAACCGCACACACATAGAAGTGATATTAATAAGCAAAACAAC
TATAGGCTTTAGCCAAAGTTACAAATTAATACAACTCGCTGCTGCCTTCA
TTCTACATTCCGAAAATAGTCGTAAGCAAAAGGAAGAATTTTACTAATTC
CAGGCACCATTTGAGCAAAATTCTCAATCGATATCACTACACGACAGTGG
TGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAA
AAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGAACACAGGACATT
TGCTTAGTATTACAAAGCATCAGCGAGATAATATTCAAATTATTCATCCA
CTACCAATAGAAGCAAACTTGAACAGCATGGATAGTTTTCACTTTTCAAC
TCAGATTTAAGCTAGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCC
AAGTGAAGTCTGGGTCATCCCTGCCCAAGTGTCCATAGGCAGCATTCTTC
ATGAACCTGCCGTTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCAT
TCCTGGCCTGAAATCACAGCTTTCCTTCACAATTTTGAGGATCTCCTTGT
CAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACAGACTATGGCTCA
GGCACACCAATGGCATAGGAGACTTGGACAATGCACCTGCGAGCAAGCCC
GTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCACTCC
TA
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