CX675693

Overview
NameCX675693
Unique NameCX675693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2423 contig Csv1_Contig2423:442..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI2_DICDI (Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17
Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   68 GEEADDDSVEGSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            G+   D       ++ ++NF +   E+ + +V FYAPWC  CK LKP +E+AAK +        + +I +AKVDCT+  +LC+++ +Q YP++ +F+ G            E Y GDR T  +V+ +EE + P
Sbjct:   32 GDHEHDHDESFVKILDSDNFHNSVSEHDVTLVMFYAPWCGHCKTLKPLYEEAAKQL------SANKKIAIAKVDCTQHEQLCKQNKVQGYPTLVVFKNGK----------AEPYEGDRTTKSIVQTLEEELKP 148          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA4_RAT (Protein disulfide-isomerase A4 OS=Rattus norvegicus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17
Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  110 VTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +T  NFD   +   I++V FYAPWC  CK+L P +EKAAK + +R  P     I LAKVD TE+ +L +R  +  YP+++IFRKG              Y G R+  G+V  M E   P
Sbjct:  180 LTKENFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPP-----IPLAKVDATEQTDLAKRFDVSGYPTLKIFRKGRPF----------DYNGPREKYGIVDYMVEQSGP 283          

HSP 2 Score: 73.559 bits (179), Expect = 1.578e-12
Identity = 41/137 (29.93%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   71 EEADDDSVE-----GSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +E D+D +E     G  ++   NFD++  +   +++ FYAPWC  CK+  P +EK A T+++   P     I +AK+D T    L  +  +  YP+I+I +KG  V           Y G R  + +V  + E+  P
Sbjct:   47 DEEDEDDLEVKEENGVWVLNDENFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPP-----IAVAKIDATSASMLASKFDVSGYPTIKILKKGQAV----------DYDGSRTQEEIVAKVREVSQP 168          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA4_MOUSE (Protein disulfide-isomerase A4 OS=Mus musculus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  110 VTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +T +NFD   +   I++V FYAPWC  CK+L P +EKAAK + +R  P     I LAKVD TE+ +L +R  +  YP+++IFRKG              Y G R+  G+V  M E   P
Sbjct:  175 LTKDNFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPP-----IPLAKVDATEQTDLAKRFDVSGYPTLKIFRKGRPF----------DYNGPREKYGIVDYMIEQSGP 278          

HSP 2 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 2
Query:   53 NSLKHGEEADDDSVE-----GSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            N+ +  EE DDD +E     G  ++   NFD++  +   +++ FYAPWC  CK+  P +EK A T+++   P     I +AK+D T    L  +  +  YP+I+I +KG  V           Y G R  + +V  + E+  P
Sbjct:   36 NATEEEEEEDDDDLEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPP-----IAVAKIDATSASMLASKFDVSGYPTIKILKKGQAV----------DYDGSRTQEEIVAKVREVSQP 163          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA4_HUMAN (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  107 MVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            ++T  NFD   ++  I++V FYAPWC  CK+L P +EKAAK + +R  P     I LAKVD T E +L +R  +  YP+++IFRKG              Y G R+  G+V  M E   P
Sbjct:  181 VLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPP-----IPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPY----------DYNGPREKYGIVDYMIEQSGP 285          

HSP 2 Score: 72.0182 bits (175), Expect = 4.591e-12
Identity = 48/164 (29.27%), Postives = 74/164 (45.12%), Query Frame = 2
Query:    2 GPDLRPTGSEFHSMPVINSLKHGEEADDDSVE---------GSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            GPD   +  E      I   +  EE DDD  E         G  ++   NFD++  +   +++ FYAPWC  CK+  P +EK A  ++++  P     I +AK+D T    L  R  +  YP+I+I +KG  V           Y G R  + +V  + E+  P
Sbjct:   26 GPDEDSSNRE----NAIEDEEEEEEEDDDEEEDDLEVKEENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPP-----IPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV----------DYEGSRTQEEIVAKVREVSQP 170          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 61/184 (33.15%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   50 INSLKHGEEADDDSV-----EGSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP---IPLEESHKLALDGKHKTTAEN----VKRPAPKAGGCR 565
            +++++  E+A DD +     EG  ++T  NFD++  + P ++V FYAPWC  CK L P +EKA+  +           I LAKVD T E EL +R  IQ YP+++ ++ G    D         Y G RD  G+V+ +E  V P    P EE   L  +      + N    V+  AP  G C+
Sbjct:   16 VSAVRSTEDASDDELNYEMDEGVVVLTDKNFDAFLKKNPSVLVKFYAPWCGHCKHLAPEYEKASSKV----------SIPLAKVDATVETELGKRFEIQGYPTLKFWKDGKGPND---------YDGGRDEAGIVEWVESRVDPNYKPPPEEVVTLTTENFDDFISNNELVLVEFYAPWCGHCK 180          

HSP 2 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 38/119 (31.93%), Postives = 62/119 (52.10%), Query Frame = 2
Query:  110 VTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            +T  NFD +     +++V FYAPWC  CK+L P +EKAA+ ++ +       ++ L KVD T E +L  ++ +  YP+++I R G              Y G R+  G++K M +   P
Sbjct:  152 LTTENFDDFISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQ-----GSKVKLGKVDATIEKDLGTKYGVSGYPTMKIIRNGR----------RFDYNGPREAAGIIKYMTDQSKP 255          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 2
Query:   71 EEADDDSVEGSHMVT--ANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVE--LCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAPIPLE 478
            EE    + EG  ++T   ++FD    ++P +VV FYAPWC  CK+L P +E AAK +  ++DP     I+LAKVD  EE    L  ++ IQ +P+I+IFR       D G +  E Y G R+ DG+V  +++ V P   E
Sbjct:   24 EEEPAAAAEGEAVLTLDVDSFDEAVAKHPFMVVEFYAPWCGHCKKLAPEYENAAKAL-SKHDPP----IVLAKVDANEEKNRPLATKYEIQGFPTIKIFR-------DRGKNIQE-YKGPREADGIVDYLKKQVGPASKE 150          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDIA4_BOVIN (Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 47/120 (39.17%), Postives = 67/120 (55.83%), Query Frame = 2
Query:  107 MVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            ++T +NFD   ++  I++V FYAPWC  CK+L P +EKAAK + +   P     I LAKVD   E +L +R  + +YP+++IFRKG             SY G R+  G+V  M E   P
Sbjct:  180 VLTKDNFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKSSPP-----IPLAKVDAIAETDLAKRFDVSSYPTLKIFRKGKAF----------SYNGPREKYGIVDYMMEQSGP 284          

HSP 2 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 2
Query:   71 EEADDDSVE-----GSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            ++ DDD +E     G  ++   NFD++  +   +++ FYAPWC  CK+  P +EK A T++E   P     I +AK+D T E  L  R  +  YP+I+I +KG +V           Y G R  + +V  ++E+  P
Sbjct:   48 DDDDDDDLEVKEENGVLILNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIAATLKENDPP-----IPVAKIDATSESALASRFDVSGYPTIKILKKGQEV----------DYEGSRTQEEIVAKVKEVSQP 169          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 2
Query:  116 ANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVE--LCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAPIPLE 478
            A+NFD    ++P ++V FYAPWC  CK L P +EKAA+ +  ++DP     I+LAKVD  +E    L  ++ +Q +P+++IFR G          + + Y G R+ +G+V+ +++ V P   E
Sbjct:   46 ADNFDDAIAKHPFILVEFYAPWCGHCKSLAPEYEKAAQLL-SKHDP----AIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRSGG--------KNIQEYKGPREAEGIVEYLKKQVGPASKE 155          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 2
Query:  116 ANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVE--LCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAPIPLE 478
            A+NFD    ++P ++V FYAPWC  CK L P +EKAA+ +  ++DP     I+LAKVD  +E    L  ++ +Q +P+++IFR G            + Y G R+ +G+V+ +++ V P   E
Sbjct:   45 ADNFDDAIGQHPFILVEFYAPWCGHCKSLAPEYEKAAQLL-SKHDP----AIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRNGG--------KSIQEYKGPREAEGIVEYLKKQVGPASKE 154          
BLAST of CX675693 vs. ExPASy Swiss-Prot
Match: PDI_ASPOR (Protein disulfide-isomerase OS=Aspergillus oryzae GN=pdiA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 2
Query:   74 EADDDSVEGSHMVTANNFDSYSHEYPILVVNFYAPWCYWCKRLKPSWEKAAKTMRERYDPEMDGRILLAKVDCTEEVELCRRHHIQAYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDGLVKAMEELVAP 466
            EA  D V     +T + F+++  E+ +++  F+APWC  CK L P +E+AA  ++E+  P       L KVDCTEE  LCR   ++ YP+++IFR         G    + Y G R T+ +V  M +   P
Sbjct:   26 EAPSDVVS----LTGDTFETFVKEHDLVLAEFFAPWCGHCKALAPKYEQAATELKEKNIP-------LVKVDCTEEEALCRDQGVEGYPTLKIFR---------GLDAVKPYQGARQTEAIVSYMVKQSLP 136          
The following BLAST results are available for this feature:
BLAST of CX675693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDI2_DICDI3.629e-1733.83Protein disulfide-isomerase 2 OS=Dictyostelium dis... [more]
PDIA4_RAT6.190e-1740.34Protein disulfide-isomerase A4 OS=Rattus norvegicu... [more]
PDIA4_MOUSE6.190e-1740.34Protein disulfide-isomerase A4 OS=Mus musculus GN=... [more]
PDIA4_HUMAN8.084e-1740.00Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
PDIA4_CAEEL8.084e-1733.15Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
PDI_MAIZE1.801e-1638.57Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDIA4_BOVIN3.072e-1639.17Protein disulfide-isomerase A4 OS=Bos taurus GN=PD... [more]
PDI_WHEAT4.436e-1535.77Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_HORVU4.436e-1535.77Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
PDI_ASPOR1.686e-1434.35Protein disulfide-isomerase OS=Aspergillus oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_64B02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64B02-C4-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675693 ID=CX675693; Name=CX675693; organism=Citrus sinensis; type=EST; length=832bp
AGGACCTGATTTAAGACCCACTGGTTCTGAATTCCACTCAATGCCTGTTA
TAAATTCGCTTAAGCATGGAGAGGAAGCTGATGATGATTCTGTTGAAGGT
TCTCATATGGTAACTGCCAATAATTTTGATAGTTATTCACATGAGTATCC
TATTTTAGTTGTCAATTTTTACGCTCCATGGTGCTACTGGTGTAAACGCC
TGAAACCATCATGGGAGAAAGCAGCCAAAACAATGAGAGAAAGGTATGAT
CCGGAAATGGATGGACGTATTCTTTTGGCAAAAGTTGATTGCACTGAAGA
AGTCGAGTTATGTAGGAGGCATCATATACAAGCGTATCCATCTATTCGCA
TATTCCGCAAAGGAAGTGATGTTAGAGACGATCATGGACACCATGATCAT
GAATCCTATTATGGAGATAGAGATACAGATGGCCTGGTCAAGGCTATGGA
AGAATTAGTTGCACCTATTCCTCTGGAGGAGTCTCATAAGCTAGCTTTGG
ATGGTAAACATAAAACTACTGCTGAAAATGTTAAAAGACCAGCACCAAAG
GCAGGAGGATGCAGAATTGAAGGATATGTGCGTGTGAAGAAGGTTCCCGG
TAATCTTATCATCTCAGCTCGTTCCGGAGCCCATTCATTTGATACTTCTG
AAATGAATATGTCACATGTTATATCCCATCTCTCATTTGGTCGGAAACTG
TCCCCTAAGGTGATGAGTGATGTTCAGCGATTGATACCTTATCTTGGTGG
AAGCCACGACAGGCTGAATGGTCGGTCATTCATTAATCATCGGGAAGTAG
GCGCAAATGTTACTATAGAGCATTATCTTCAA
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