CK939495

Overview
NameCK939495
Unique NameCK939495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3233 contig Csv1_Contig3233:564..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 2.965e-72
Identity = 136/188 (72.34%), Postives = 155/188 (82.45%), Query Frame = 1
Query:   52 LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKK-XXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            ++SPFK D+++G+VALITGGGSGIGFEIS+QFGKHGAS+AIMGRRKQVLD AVSALRSLGI+A+G EGDVR+QE A++VVE+TF+HFGKLDILVNAAAGNFL +AEDLSPNGFRTV+DID+VGTF MCH ALKYLKK             I+NISATLHYTASWYQ             TRNLALEWG
Sbjct:    1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWG 188          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_MOUSE (Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 73/184 (39.67%), Postives = 98/184 (53.26%), Query Frame = 1
Query:   64 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+GR  Q V  AA   + + G + +    DVR        V+   + FGK++IL+N AAGNFL  A  LS N F+TV+DID++GTF +   ++ Y K             I+NI+ATL       Q             TR+LA+EWG
Sbjct:   21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRCLPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIGTFNV--SSVLYKK-----FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLAVEWG 197          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_DANRE (Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25
Identity = 71/184 (38.59%), Postives = 93/184 (50.54%), Query Frame = 1
Query:   64 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            +  D+L  +VA ITGGGSGIGF I+    +HG    I  R  + +  A   L S  G + +    DVR+ E     V+ T + FG++DIL+N AAGNFL  A  LS N F+TVM+ID++GTF          K             I+NISATL Y     Q             TR+LA+EWG
Sbjct:   28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRCLPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTFNTS-------KVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEWG 204          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_RAT (Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.350e-24
Identity = 72/184 (39.13%), Postives = 97/184 (52.72%), Query Frame = 1
Query:   64 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+ R   +V +AA   + + G + +    DVR        V+   + FGK+DIL+N AAGNFL  A  LS N F+TV+DID++GTF +    + Y K             I+NI+ATL       Q             TR+LA+EWG
Sbjct:   21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRCLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLGTFNV--SRVLYEK-----FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLAVEWG 197          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_HUMAN (Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.698e-24
Identity = 73/184 (39.67%), Postives = 94/184 (51.09%), Query Frame = 1
Query:   64 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ GTF +    + Y K             I+NI+ATL       Q             TR+LA+EWG
Sbjct:   21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV--SRVLYEK-----FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 197          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: DECR2_PONAB (Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23
Identity = 73/184 (39.67%), Postives = 94/184 (51.09%), Query Frame = 1
Query:   64 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ GTF +    + Y K             I+NI+ATL       Q             TR+LA+EWG
Sbjct:   21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV--SRVLYEK-----FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 197          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: SPS19_YEAST (Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae GN=SPS19 PE=1 SV=4)

HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20
Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 1
Query:   43 KMSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-----IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQXXXXXXXXXXXXXTRNLALEWG 612
            K   E  ++ D+ KGKVA +TGG   I    +      G   AI+GR ++  + A   +  L      + A+    DVR  E  +  V+ T E FGK+D ++  AAGNF+    +LSPN F++V+DID +G+F      LK LKK            IL +SAT HY    +Q              +NLA+E G
Sbjct:   10 KFVTEGSWRPDLFKGKVAFVTGGAGTICRVQTEALVLLGCKAAIVGRDQERTEQAAKGISQLAKDKDAVLAIA-NVDVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSVVDIDLLGSFNTAKACLKELKK--------SKGSILFVSATFHYYGVPFQGHVGAAKAGIDALAKNLAVELG 195          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17
Identity = 47/134 (35.07%), Postives = 75/134 (55.97%), Query Frame = 1
Query:   55 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-----SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 441
            +S   A +LK +VA++TGGG+GIG  +S +    G +V I  R+   L AAV  LR     S   +    + ++R++E    +V+ST   +GK++ LVN   G F+   ED++  G+  V++ +  GTF MC E
Sbjct:    8 QSYLAAGLLKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLDRLTAAVDELRASLPPSSSAEVSAIQCNIRKEEEVSNLVKSTLAKYGKINFLVNNGGGQFMAPVEDITAKGWHAVIETNLTGTFYMCKE 141          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: YXEK_CAEEL (Uncharacterized oxidoreductase F53C11.3 OS=Caenorhabditis elegans GN=F53C11.3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.560e-17
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 1
Query:   79 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL-DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 441
            L GKVAL+TGGG+G+G  I+T F   GASVAI  RR  VL+     +R S G     F+ DV+      K  ++  +  G   DIL+N AAGNF+++ E LSPN + T++DI   GT  +  E
Sbjct:   24 LNGKVALVTGGGTGLGKAIATTFAHLGASVAIAARRLDVLEKTADEIRSSTGGVCEPFQMDVKDPAKVAKAFDAVEKKLGHTPDILINNAAGNFIMATERLSPNAYGTIIDIVLKGTLHVTTE 146          
BLAST of CK939495 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17
Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   55 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-----SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 435
            +S   A +L+ +VA++TGG +GIG  IS +    G +V I  R+   L AAV  LR     S   +    + ++R++E    +V+ST   +GK++ LVN A G F+  AED++  G++ V++ +  GTF MC
Sbjct:    8 QSYLAAGLLQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMC 139          
The following BLAST results are available for this feature:
BLAST of CK939495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
DECR2_ARATH2.965e-7272.34Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidops... [more]
DECR2_MOUSE9.346e-2639.67Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus muscu... [more]
DECR2_DANRE4.639e-2538.59Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rer... [more]
DECR2_RAT1.350e-2439.13Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus no... [more]
DECR2_HUMAN6.698e-2439.67Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapi... [more]
DECR2_PONAB1.143e-2339.67Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abe... [more]
SPS19_YEAST5.868e-2033.33Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Sac... [more]
PECR_MOUSE2.726e-1735.07Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]
YXEK_CAEEL3.560e-1743.09Uncharacterized oxidoreductase F53C11.3 OS=Caenorh... [more]
PECR_RAT4.649e-1735.61Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_H06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939495 ID=CK939495; Name=CK939495; organism=Citrus sinensis; type=EST; length=613bp
GGGAAGGACAAGCAGCAAAAGCGGTCAGATAAAGAAATAAGCAAAATGTC
GTTGGAATCTCCGTTCAAGGCCGATATATTGAAAGGCAAAGTCGCTTTGA
TCACAGGAGGTGGTTCGGGAATTGGGTTTGAGATATCAACCCAATTCGGT
AAACATGGAGCTTCAGTTGCAATCATGGGACGTCGCAAGCAAGTCCTTGA
TGCTGCTGTTTCTGCTCTTCGGTCTCTTGGAATCAAGGCTGTTGGCTTTG
AAGGAGATGTTCGTAGGCAGGAACATGCGAAAAAAGTTGTGGAATCAACT
TTTGAGCATTTTGGGAAGCTTGACATTCTTGTGAATGCTGCGGCCGGCAA
CTTTCTTGTATCAGCTGAGGATTTGTCCCCTAATGGGTTTCGAACAGTTA
TGGATATTGATTCTGTCGGCACATTCACAATGTGCCATGAAGCACTTAAA
TATCTTAAAAAAGGTGGACCTGGGAGAAGCTCAACTGGTGGTGGATCCAT
TTTGAACATTAGTGCTACTTTACATTATACAGCTTCTTGGTACCAAGTAC
ATGTAACTGCAGCCAAGGCAGCTGTTGATGCCGTTACCAGAAACTTGGCA
CTGGAATGGGGAG
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