CX675690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.618e-25 Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 2 Query: 242 VEEFGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNN-HLEDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 V F + L+ LCD ++PV++TE SYI+REG+P+D+MLF+++GKL T T+ +G LN+ +L GDF GEEL+ WA SSNLPIST+T++AL VEAF L ADDLK V Sbjct: 484 VPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNG-----GRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFV 598
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23 Identity = 54/117 (46.15%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNNHL-EDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F N + L+ +C+ +KP +FTE+SY++REG+P+++MLF+++G+L S+T SG N L ++GDF G+EL+ WA + SNLP ST+T++ALT VEAF L+AD+LK V Sbjct: 515 FENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRL-----ESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFV 626
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 54/117 (46.15%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNNHL-EDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F N + L+ +C+ +KP ++TE SY++REG+P+++MLF+++G+L S+T SG N L ++GDF GEEL+ WA + SNLP ST+T +ALT VEAF L+AD+LK V Sbjct: 514 FENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRL-----ESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFV 625
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 275 LERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRS-ITGFSSNSGNLNNHLEDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 L+ +CD +KPV++TE SY +REG+P+++MLFV++GKL + T+ TGF + +L+ DF GE+L+ WA + SS+ PIST+T+QALT VEAF L ADDLK V Sbjct: 483 LDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAV-----YLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLV 586
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.709e-22 Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNNHL-EDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F N + L+ +C+ +KP +FTE +YI+REG+P+++M+F+++G+L S+T SG N L ++GDF GEEL+ WA + SNLP ST+T++ALT VEAF L A++LK V Sbjct: 503 FANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRL-----ESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 614
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.539e-22 Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNNHL-EDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F N + L+ +C+ +KP ++TE +YI+REG+P+++MLF+++G+L S+T SG N L ++GDF GEEL+ WA + SNLP ST+T++ALT VEAF L A++LK V Sbjct: 509 FANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRL-----ESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 620
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = 2 Query: 275 LERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNN-HLEDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 L+ +CD ++PV++TE SY++REG+P+ +MLFV++G+L + T+ SG N +L+ DF GE+L+ WA + SS+ PIST+T+QALT VEAF L A+DLK V Sbjct: 482 LDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNG-----GRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSV 585
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.912e-21 Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNNHL-EDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F + D L+ +C +KP +FTE +Y++REG+P+D+MLF+++G+L S+T SG N L ++G+F GEEL+ WA + NLP ST+T++ALT VEAF L +++LK V Sbjct: 499 FKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRL-----ESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFV 610
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18 Identity = 47/117 (40.17%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRSITGFSSNSGNLNN-HLEDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F D L+ +C+ + P + T+ +Y++REG+P+++MLF+++G++ S T SG N+ L GDF GEEL+ WA + NLP+ST+T++ L+ VEAF L A+DLK V Sbjct: 458 FAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQM-----ESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFV 569
BLAST of CX675690 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18 Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 251 FGNWSDSSLERLCDVVKPVVFTERSYILREGNPIDQMLFVLQGKLWTYTSRS-ITGFSSNSGNLNNHLEDGDFSGEELIAWAKADRDSSNLPISTKTIQALTNVEAFVLMADDLKQV 598 F D L+ +C+ + + T+ +YI+REG+P+ +MLF+++GKL + T+ TGF ++ L GDF GEEL+AWA + + NLP ST+T++AL VEAF L A DLK V Sbjct: 482 FAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSIT-----LRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFV 593 The following BLAST results are available for this feature:
BLAST of CX675690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675690 ID=CX675690; Name=CX675690; organism=Citrus sinensis; type=EST; length=807bpback to top |