CX675689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.735e-88 Identity = 153/199 (76.88%), Postives = 172/199 (86.43%), Query Frame = 1 Query: 208 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTI 804 THSMPP+K+E+FKSLE WA N+L LKPVE+CWQPQDFLPD F F +QVR LRER LPD+YFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM +EKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTARL+KE GD LA+ICGTI Sbjct: 62 THSMPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFLPDSA--FEGFHEQVRELRERAKELPDEYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQVEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARLAKEHGDIKLAQICGTI 258
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_RICCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.419e-87 Identity = 161/259 (62.16%), Postives = 191/259 (73.75%), Query Frame = 1 Query: 55 MQASQFLVTSTKPPAACSPLVPNPAHNRL----TAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 ++ + FL + K P+ P + + + T S + + PP+ THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQDFLPDP F +QVR LRER +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA Sbjct: 3 LKLNPFLSQTQKLPSFALPPMASTRSPKFYMASTLKSGSKEVENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPAS--DGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIA 259
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_SOYBN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.854e-87 Identity = 157/226 (69.47%), Postives = 179/226 (79.20%), Query Frame = 1 Query: 142 TAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 T S + I PP+ THSMPP+K+E+F+SLE WA N+L LKPVEKCWQPQDFLPDP+ F +QV+ LRER LPDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHGNTARL+KE GD LA+ICG IA Sbjct: 31 TLRSGSKEVENIKKPFTPPREVHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDPSS--DGFEEQVKELRERAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARLAKEHGDIKLAQICGMIA 254
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_SIMCH (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Simmondsia chinensis PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.854e-87 Identity = 163/249 (65.46%), Postives = 190/249 (76.31%), Query Frame = 1 Query: 97 AACSPLVPNPAH---NRLTAASSTVRF--RKISAVAAPPKP-------KTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 A S +P H +R+ ASST+ ++I P P KTHSMPP+K+E+FKSLE WA NVL LKPVEKCWQPQDFLPDP F DQV+ LRERT +PD+Y VVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYL+GRVDM IEKT+QYLI +GMDP +ENNPYLGF+YTSFQERATFISHGNTARL+K+ GD LA++CG IA Sbjct: 15 AVTSSGLPRSYHLRSHRVFMASSTIGITSKEIPNAKKPHMPPREAHVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDPAS--EGFMDQVKELRERTKEIPDEYLVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAIWTRAWTAEENRHGDLLNKYLYLTGRVDMKQIEKTIQYLIGSGMDPRSENNPYLGFIYTSFQERATFISHGNTARLAKDHGDFQLAQVCGIIA 261
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_SOLCO (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum commersonii PE=2 SV=2) HSP 1 Score: 320.857 bits (821), Expect = 5.394e-87 Identity = 162/251 (64.54%), Postives = 185/251 (73.71%), Query Frame = 1 Query: 67 QFLVTSTKPPAACSPLVPNPAHNRLTAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 Q + T+ +P CSPL T +V + +PP+ THSMPPEK E+F SL WA NN+L LKPVEKCWQ DFLPDP F DQV+ LRER +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTAR +KE GD LA++CG IA Sbjct: 11 QSIKTTRRP---CSPLRSPRVFMASTLRPPSVEDGNVKKPFSPPREVHVQVTHSMPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFLPDPAS--EGFEDQVKELRERCKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARHAKEHGDMKLAQVCGIIA 256
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_BRANA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.202e-86 Identity = 160/250 (64.00%), Postives = 188/250 (75.20%), Query Frame = 1 Query: 79 TSTKPPAACSPLVPNPAHNRLTAASSTVRFRKISAVAAPPKPKT-------HSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 +S +PP + +P L ++S + +++ ++ P P HSMPP+K+E+FKS+E WA N+L LK VEK WQPQDFLPDP F DQVR LRER LPDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TENNPYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA Sbjct: 17 SSARPPIST---FRSPKFLCLASSSPALSSKEVESLKKPFTPPKEVHVQVLHSMPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFLPDPAS--DGFEDQVRELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTARQAKEHGDLKLAQICGTIA 261
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_ELAGV (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2) HSP 1 Score: 317.39 bits (812), Expect = 5.964e-86 Identity = 154/231 (66.67%), Postives = 182/231 (78.79%), Query Frame = 1 Query: 136 RLTAASSTVRFRKISAVAAPPKPK-------THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 R++ AS+ K+ P P THSMPP+K+E+FKSLE WA NN+L LKPVEKCWQPQDFLPDP+ F ++V+ LRER+ +PD Y+V LVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WA+W R+WTAEENRHGDLL +LYLSGRVDM IEKT+QYLI +GMDP TEN+PYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA Sbjct: 28 RISMASTVGPSTKVEIPKKPFMPPREVHVQVTHSMPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFLPDPSS--EGFHEEVKELRERSKEIPDGYYVCLVGDMITEEALPTYQTMLNTLDGVRDETGASLTSWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMKQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARHAKEHGDVKLAQICGTIA 256
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_CARTI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.964e-86 Identity = 152/226 (67.26%), Postives = 179/226 (79.20%), Query Frame = 1 Query: 142 TAASSTVRFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 T SST + PP+ THSMPP+K+E+FKS+E WA N+L LKPVEKCWQ QDFLPDP F +QV+ LR R +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS +PWA+W R+WTAEENRHGDLL ++LYLSGRVDM I+KT+QYLI +GMDP TEN+PYLGF+YTSFQERATF+SHGNTAR +K+ GD LA+ICGTIA Sbjct: 36 TLGSSTPKVDNAKKPFQPPREVHVQVTHSMPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFLPDPAS--EGFDEQVKELRARAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAVWTRAWTAEENRHGDLLHTYLYLSGRVDMRQIQKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFVSHGNTARHAKDHGDVKLAQICGTIA 259
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_ORYSJ (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0379900 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 2.266e-85 Identity = 155/253 (61.26%), Postives = 191/253 (75.49%), Query Frame = 1 Query: 70 FLVTSTKPPAACSPLVPNPAH--NRLTAASSTV-RFRKISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 F + T P +C + ++ +++ A +ST+ R + PP+ HS+PP+K E+F SL+ WA N+L LLKPVEK WQPQDFLPDP+ F D+V+ LRER +PDDYFV LVGDM+TE+A+PTYQTM+NTLDGVRDETGAS + WA+W R+WTAEENRHGDLL ++YL+GRVDM IEKT+QYLI +GMDPGTENNPYLGF+YTSFQERATFISHGNTAR +KE GD LA+ICGTIA Sbjct: 3 FAASHTASPYSCGGVAQRRSNGMSKMVAMASTINRVKTAKKPYTPPREVHLQVKHSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSS--DGFYDEVKELRERAKEIPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGDLLNKYMYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTARHAKEYGDLKLAQICGTIA 253
BLAST of CX675689 vs. ExPASy Swiss-Prot
Match: STAD_GOSHI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.049e-85 Identity = 149/204 (73.04%), Postives = 169/204 (82.84%), Query Frame = 1 Query: 196 PKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENRHGDLLRSFLYLSGRVDMLMIEKTVQYLISAGMDPGTENNPYLGFVYTSFQERATFISHGNTARLSKEGGDPVLARICGTIA 807 P THSMPP K+E+FKSLE WA NN+L LKPVEKCWQP DFLPDP F +QV+ LRER +PDDYFVVLVGDMITE+A+ TYQTM+NTLDG RDETGAS +PWAIW R+WTAEENRHGDLL +LYLSGRVDM IE+T+QYLI +GMDP TEN+PY GF+YTSFQERATFISHGNT RL+KE GD LA+ICG+IA Sbjct: 58 PVQITHSMPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFLPDPNS--DGFHEQVKELRERAKEIPDDYFVVLVGDMITEEALSTYQTMLNTLDGTRDETGASLTPWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIERTIQYLIGSGMDPHTENSPYRGFIYTSFQERATFISHGNTGRLAKEYGDINLAQICGSIA 259 The following BLAST results are available for this feature:
BLAST of CX675689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675689 ID=CX675689; Name=CX675689; organism=Citrus sinensis; type=EST; length=807bpback to top |